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bioconductor-blase

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Bulk Linking Analysis for Single-cell Experiments

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-blase

Usage Tracking

1.0.0
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Downloads (Last 6 months): 0

Description

BLASE is a method for finding where bulk RNA-seq data lies on a single-cell pseudotime trajectory. It uses a fast and understandable approach based on Spearman correlation, with bootstrapping to provide confidence. BLASE can be used to "date" bulk RNA-seq data, annotate cell types in scRNA-seq, and help correct for developmental phenotype differences in bulk RNA-seq experiments.

About

Summary

Bulk Linking Analysis for Single-cell Experiments

Last Updated

Mar 2, 2026 at 19:17

License

GPL (>= 3)

Supported Platforms

noarch