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bioconductor-biggr

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Constraint based modeling in R using metabolic reconstruction databases

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-biggr

Usage Tracking

1.34.0
1.30.0
1.28.0
1.26.0
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Downloads (Last 6 months): 0

Description

This package provides an interface to simulate metabolic reconstruction from the BiGG database(http://bigg.ucsd.edu/) and other metabolic reconstruction databases. The package facilitates flux balance analysis (FBA) and the sampling of feasible flux distributions. Metabolic networks and estimated fluxes can be visualized with hypergraphs.

About

Summary

Constraint based modeling in R using metabolic reconstruction databases

Last Updated

Nov 7, 2022 at 17:49

License

file LICENSE

Total Downloads

10.1K

Supported Platforms

noarch