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bioconductor-bader

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Bayesian Analysis of Differential Expression in RNA Sequencing Data

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-bader

Usage Tracking

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Description

For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.

About

Summary

Bayesian Analysis of Differential Expression in RNA Sequencing Data

Last Updated

Dec 14, 2024 at 14:43

License

GPL-2

Total Downloads

55.0K

Supported Platforms

linux-64
macOS-64