bioconductor-appreci8r
appreci8R: an R/Bioconductor package for filtering SNVs and short indels with high sensitivity and high PPV
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Description
The appreci8R is an R version of our appreci8-algorithm - A Pipeline for PREcise variant Calling Integrating 8 tools. Variant calling results of our standard appreci8-tools (GATK, Platypus, VarScan, FreeBayes, LoFreq, SNVer, samtools and VarDict), as well as up to 5 additional tools is combined, evaluated and filtered.
About
Summary
appreci8R: an R/Bioconductor package for filtering SNVs and short indels with high sensitivity and high PPV
Last Updated
Nov 11, 2022 at 14:06
License
LGPL-3
Total Downloads
18.7K
Supported Platforms
noarch