bioconductor-annmap
Genome annotation and visualisation package pertaining to Affymetrix arrays and NGS analysis.
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Description
annmap provides annotation mappings for Affymetrix exon arrays and coordinate based queries to support deep sequencing data analysis. Database access is hidden behind the API which provides a set of functions such as genesInRange(), geneToExon(), exonDetails(), etc. Functions to plot gene architecture and BAM file data are also provided. Underlying data are from Ensembl. The annmap database can be downloaded from: https://figshare.manchester.ac.uk/account/articles/16685071
About
Summary
Genome annotation and visualisation package pertaining to Affymetrix arrays and NGS analysis.
Last Updated
Dec 27, 2024 at 13:53
License
GPL-2
Total Downloads
42.1K
Supported Platforms
noarch
Unsupported Platforms
linux-64 Last supported version: 1.22.0
macOS-64 Last supported version: 1.22.0