autometa
Automated extraction of genomes from shotgun metagenomes
Automated extraction of genomes from shotgun metagenomes
To install this package, run one of the following:
An automated binning pipeline for metagenomes, in particular host-associated and highly complex ones. Miller, I. J.; Rees, E. R.; Ross, J.; Miller, I.; Baxa, J.; Lopera, J.; Kerby, R. L.; Rey, F. E.; Kwan, J. C. Autometa: Automated extraction of microbial genomes from individual shotgun metagenomes. Nucleic Acids Research, 2019. DOI: https://doi.org/10.1093/nar/gkz148
Summary
Automated extraction of genomes from shotgun metagenomes
Last Updated
Jun 14, 2024 at 20:37
License
AGPL-3.0
Total Downloads
16.9K
Supported Platforms
GitHub Repository
https://github.com/KwanLab/AutometaDocumentation
https://autometa.readthedocs.io/en/latest/