amrfior

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AMRfíor: A customisable and multi-tool approach for antimicrobial resistance gene detection

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Installation

To install this package, run one of the following:

Conda

$conda install bioconda::amrfior

Usage Tracking

Version

5 / 8 versions selected

Downloads (Last 6 months): 0

Description

AMRfíor orchestrates multiple alignment tools (BLAST, DIAMOND, Bowtie2, BWA, Minimap2) to search DNA and protein sequences against AMR databases with transparent, coverage-based validation.

About

Summary

AMRfíor: A customisable and multi-tool approach for antimicrobial resistance gene detection

Last Updated

Feb 22, 2026 at 17:24

License

GPL-3.0-only

Total Downloads

430

Version Downloads

Supported Platforms

noarch

Home

https://github.com/NickJD/AMRfior

GitHub Repository

https://github.com/NickJD/AMRfior

Documentation

https://github.com/NickJD/AMRfior