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agat

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Another Gff Analysis Toolkit (AGAT). Suite of tools to handle gene annotations in any GTF/GFF format.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::agat

Usage Tracking

1.5.1
1.5.0
1.4.2
1.4.1
1.4.0
5 / 8 versions selected
Downloads (Last 6 months): 0

Description

AGAT has the power to check, fix, pad missing information (features/attributes) of any kind of GTF and GFF to create complete, sorted and standardised GTF/GFF formats. Over the years it has been enriched by many many tools to perform just about any tasks that is possible related to GTF/GFF format files (sanitizing, conversions, merging, modifying, filtering, FASTA sequence extraction, adding information, etc). Comparing to other methods AGAT is robust to even the most despicable GTF/GFF files.

About

Summary

Another Gff Analysis Toolkit (AGAT). Suite of tools to handle gene annotations in any GTF/GFF format.

Last Updated

Jul 22, 2025 at 16:40

License

GPLv3

Total Downloads

82.0K

Supported Platforms

noarch