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nanocount

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NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads

Installation

To install this package, run one of the following:

Conda
$conda install aleg::nanocount

Usage Tracking

1.0.0.post6
1.0.0.post5
1.0.0.post4
1.0.0.post3
1.0.0.post2
5 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads

Last Updated

Oct 27, 2021 at 22:32

License

MIT

Total Downloads

750

Supported Platforms

noarch