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germline

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GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large population. It takes as input haplotype marker data for individuals and generates a list of all shared segments. GERMLINE was developed in Itsik Pe'er's Lab at Columbia University

Installation

To install this package, run one of the following:

Conda
$conda install aehrc::germline

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1.5.3
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About

Summary

GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large population. It takes as input haplotype marker data for individuals and generates a list of all shared segments. GERMLINE was developed in Itsik Pe'er's Lab at Columbia University

Last Updated

May 24, 2019 at 14:11

License

Apache License

Supported Platforms

linux-64
macOS-64