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RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.

Type Size Name Uploaded Downloads Labels
conda 7.1 MB | osx-64/rnashapes-3.3.0-pl5321hcd10b59_7.tar.bz2  3 years and 6 months ago 2199 main
conda 5.6 MB | linux-64/rnashapes-3.3.0-pl5321h9f5acd7_7.tar.bz2  3 years and 6 months ago 286 main
conda 5.9 MB | linux-64/rnashapes-3.3.0-pl5321h7d875b9_6.tar.bz2  3 years and 7 months ago 267 main
conda 6.8 MB | osx-64/rnashapes-3.3.0-pl5321hb280591_6.tar.bz2  3 years and 7 months ago 198 main
conda 6.0 MB | linux-64/rnashapes-3.3.0-pl5262h7d875b9_5.tar.bz2  4 years and 4 months ago 301 main
conda 6.9 MB | osx-64/rnashapes-3.3.0-pl5262hb280591_5.tar.bz2  4 years and 5 months ago 135 main
conda 6.6 MB | osx-64/rnashapes-3.3.0-pl526ha1b3eb9_4.tar.bz2  4 years and 8 months ago 871 main
conda 5.2 MB | linux-64/rnashapes-3.3.0-pl526hc9558a2_4.tar.bz2  4 years and 8 months ago 359 main
conda 5.3 MB | linux-64/rnashapes-3.3.0-pl526hc9558a2_3.tar.bz2  5 years and 2 months ago 841 main
conda 5.0 MB | linux-64/rnashapes-3.3.0-pl5.22.0_0.tar.bz2  8 years and 3 months ago 2512 main cf201901

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