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RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.

Type Size Name Uploaded Downloads Labels
conda 5.7 MB | linux-64/rnashapes-3.3.2-pl5321h4ac6f70_3.tar.bz2  1 year and 9 months ago 177 main
conda 6.6 MB | osx-64/rnashapes-3.3.2-pl5321h85dcccf_3.tar.bz2  1 year and 9 months ago 108 main
conda 7.1 MB | osx-64/rnashapes-3.3.2-pl5321hcd10b59_2.tar.bz2  3 years and 17 days ago 2896 main
conda 5.6 MB | linux-64/rnashapes-3.3.2-pl5321h9f5acd7_2.tar.bz2  3 years and 19 days ago 973 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5321h7d875b9_1.tar.bz2  3 years and 1 month ago 944 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5321hb280591_1.tar.bz2  3 years and 1 month ago 1005 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5262hb280591_0.tar.bz2  3 years and 10 months ago 1382 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5262h7d875b9_0.tar.bz2  3 years and 10 months ago 1052 main

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