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gnuplot-py
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public |
No Summary
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2025-09-25 |
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soapdenovo2-gapcloser
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public |
a tool named GapCloser for SOAPdenovo.
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2025-09-25 |
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piper
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public |
A lightweight python toolkit for gluing together restartable, robust command line pipelines.
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2025-09-25 |
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amiga
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public |
Analysis of Microbial Growth Assays
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2025-09-25 |
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paraviewer
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public |
Automated visualization generator for Paraphase HiFi analysis tool
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2025-09-25 |
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ngs-bits
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public |
Short-read sequencing tools.
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2025-09-25 |
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cenmap
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public |
A centromere mapping and annotation pipeline for T2T human and primate genome assemblies implemented in Snakemake.
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2025-09-25 |
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pxblat
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public |
PxBLAT: An Efficient and Ergonomics Python Binding Library for BLAT.
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2025-09-25 |
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seqwin
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public |
Ultrafast identification of signature sequences in microbial genomes via minimizer graphs
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2025-09-25 |
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stemcnv-check
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public |
StemCNV-check: CNV Based Quality Control Workflow for Stem Cell SNP Array Data.
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2025-09-25 |
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ena-webin-cli
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public |
Data submissions to ENA can be made using the Webin command line submission interface (Webin-CLI).
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2025-09-25 |
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pbstarphase
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public |
A phase-aware pharmacogenomic diplotyper for PacBio sequencing data
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2025-09-25 |
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bamdam
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public |
A post-mapping, post-least-common-ancestor toolkit for ancient DNA analysis.
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2025-09-25 |
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merquryfk
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public |
MerquryFK replaces meryl with the FastK k-mer counter suite to considerably speed up analyses.
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2025-09-25 |
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relecov-tools
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public |
Tools for managing and processing of relecov data.
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2025-09-25 |
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flexiformatter
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public |
Moving flexiplex barcode and UMI to bam tags
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2025-09-25 |
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locityper
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public |
Targeted genotyper for complex polymorphic loci from short and long read WGS.
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2025-09-25 |
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octopusv
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public |
OctopusV: Advanced Structural Variant Analysis Toolkit.
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2025-09-25 |
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ggcaller
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public |
A de Bruijn graph-based gene-caller and pangenome analysis tool
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2025-09-25 |
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read2tree
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public |
Building phylogenetic trees directly from sequencing reads.
|
2025-09-24 |
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pecat
|
public |
A phased error correction and assembly tool
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2025-09-24 |
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rxdock
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public |
RxDock is a fork of rDock (GitLab), a fast, versatile and open-source program for docking ligands to proteins and nucleic acids.
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2025-09-24 |
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squid
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public |
Detector for fusion-gene and non-fusion-gene transcriptomic structural variations from RNA-seq data
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2025-09-24 |
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mist_typing
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public |
MiST is a rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.
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2025-09-24 |
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vuegen
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public |
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
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2025-09-24 |
