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targetdb
|
public |
Package with an application to generate report on potential drug targets.
|
2025-05-30 |
|
regenie
|
public |
Regenie is a C++ program for whole genome regression modelling of large genome-wide association studies (GWAS).
|
2025-05-29 |
|
msfragger
|
public |
Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
|
2025-05-29 |
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bioconductor-decipher
|
public |
Tools for curating, analyzing, and manipulating biological sequences
|
2025-05-29 |
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hamronization
|
public |
Tool to convert and summarize AMR gene detection outputs using the hAMRonization specification
|
2025-05-29 |
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rsem
|
public |
RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data.
|
2025-05-29 |
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kmetashot
|
public |
Fast taxonomic classifier for metagenome bins basato su k-mer/minimizer
|
2025-05-29 |
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evidencemodeler
|
public |
Evidence Modeler combines ab intio gene predictions, protein alignments, and transcript alignments into weighted consensus gene structures
|
2025-05-29 |
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beagle-lib
|
public |
general purpose library for evaluating the likelihood of sequence evolution on trees
|
2025-05-29 |
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ionquant
|
public |
A label free quantification tool
|
2025-05-29 |
|
rtg-tools
|
public |
RealTimeGenomics Tools -- Utilities for accurate VCF comparison and manipulation.
|
2025-05-29 |
|
phylopypruner
|
public |
Tree-based orthology inference.
|
2025-05-29 |
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entrez-direct
|
public |
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.
|
2025-05-28 |
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mcl
|
public |
MCL - a cluster algorithm for graphs
|
2025-05-28 |
|
btllib
|
public |
Bioinformatics common code library in C++ with Python wrappers, from Bioinformatics Technology Lab.
|
2025-05-28 |
|
r-sleuth
|
public |
Tools for investigating RNA-Seq.
|
2025-05-28 |
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metabat2
|
public |
Metagenome binning.
|
2025-05-28 |
|
vidjil-algo
|
public |
Vidjil is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes.
|
2025-05-28 |
|
mmpdb
|
public |
A package to identify matched molecular pairs and use them to predict property changes
|
2025-05-28 |
|
digest
|
public |
Fast, multi-use k-mer sub-sampling library
|
2025-05-28 |
|
arvados-python-client
|
public |
Python API for Arvados
|
2025-05-28 |
|
cutadapt
|
public |
Trim adapters from high-throughput sequencing reads
|
2025-05-28 |
|
unmicst
|
public |
UNMICST - UnMicst Nuclear Segmentation Tool
|
2025-05-28 |
|
metagraph
|
public |
Ultra Scalable Framework for DNA Search, Alignment, Assembly.
|
2025-05-28 |
|
salmon
|
public |
Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
|
2025-05-28 |
