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entrez-direct

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Entrez Direct (EDirect) is an advanced method for accessing the NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::entrez-direct

Usage Tracking

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Downloads (Last 6 months): 0

About

Summary

Entrez Direct (EDirect) is an advanced method for accessing the NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.

Last Updated

May 28, 2025 at 23:17

License

Public Domain

Total Downloads

1.4M

Supported Platforms

linux-64
macOS-64
linux-aarch64
macOS-arm64

Unsupported Platforms

noarch Last supported version: 11.0