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mitosalt
|
public |
MitoSAlt is a pipeline to identify large deletions and duplications in human and mouse mitochondrial genomes from next generation whole genome/exome sequencing data. The pipeline is capable of analyzing any circular genome in principle, as long as a proper configuration file is provided.
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2025-04-22 |
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mitorsaw
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public |
A tool for mitochondrial analysis for HiFi sequencing data
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2025-04-22 |
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artex
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public |
Artex - Artic pipeline extension
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2025-04-22 |
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metator
|
public |
Metagenomic binning based on Hi-C data.
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2025-04-22 |
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ctc-scite
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public |
CTC-SCITE is a software package to infer cell lineages of single-cells and clusters of single-cells.
|
2025-04-22 |
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vpt
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public |
Command line tool for highly parallelized processing of Vizgen data
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2025-04-22 |
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vpt-core
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public |
Core components for the Vizgen Post-processing Tool
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2025-04-22 |
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neffy-cli
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public |
NEFF calculator and MSA file converter
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2025-04-22 |
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baczy
|
public |
Bacterial toolkit
|
2025-04-22 |
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gfviewer
|
public |
A bioinformatics tool for visualizing the localization of multi-gene families across the genome of a given organism.
|
2025-04-22 |
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cleanifier
|
public |
A fast lightweight tool to remove contamination using k-mers.
|
2025-04-22 |
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rnalyze
|
public |
A comprehensive pipeline for RNA-Seq data analysis.
|
2025-04-22 |
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atol-bpa-datamapper
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public |
Map data from the BPA data portal for AToL's Genome Engine.
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2025-04-22 |
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esme_esmf_openmpi_5_0_7
|
public |
ESMF - Earth System Modeling Framework
|
2025-04-22 |
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esme_pnetcdf_openmpi_5_0_7
|
public |
PnetCDF - Parallel netCDF
|
2025-04-22 |
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esme_netcdf-c_openmpi_5_0_7
|
public |
NetCDF-C - netCDF interface for C
|
2025-04-22 |
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esme_omb_openmpi_5_0_7
|
public |
OSU Micro Benchmarks
|
2025-04-22 |
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esme_netcdf-fortran_openmpi_5_0_7
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-04-22 |
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esme_openmpi_5_0_7
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-04-22 |
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esme_pio_openmpi_5_0_7
|
public |
ParallelIO - High-level parallel I/O library
|
2025-04-22 |
|
esme_hdf5_openmpi_5_0_7
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-04-22 |
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ensembl-genomio
|
public |
Ensembl GenomIO - tools to convert basic genomic data into Ensembl cores and back to flatfile
|
2025-04-22 |
|
esme_omb_openmpi_5_0_6
|
public |
OSU Micro Benchmarks
|
2025-04-22 |
|
esme_netcdf-c_openmpi_5_0_6
|
public |
NetCDF-C - netCDF interface for C
|
2025-04-22 |
|
esme_esmf_openmpi_5_0_6
|
public |
ESMF - Earth System Modeling Framework
|
2025-04-22 |
