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bioconductor-keggprofile
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public |
An annotation and visualization package for multi-types and multi-groups expression data in KEGG pathway
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2023-06-16 |
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r-rphast
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public |
Provides an R interface to the 'PHAST'(<http://compgen.cshl.edu/phast/>) software (Phylogenetic Analysis with Space/Time Models). It can be used for many types of analysis in comparative and evolutionary genomics, such as estimating models of evolution from sequence data, scoring alignments for conservation or acceleration, and predicting elements based on conservation or custom phylogenetic hidden Markov models. It can also perform many basic operations on multiple sequence alignments and phylogenetic trees.
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2023-06-16 |
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bioconductor-mesh.oni.eg.db
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public |
Mapping table for Oreochromis niloticus Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.mmu.eg.db
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public |
Mapping table for Mus musculus Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.miy.eg.db
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public |
Mapping table for Lotus japonicus Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.eco.iai39.eg.db
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public |
Mapping table for Escherichia coli IAI39 Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.dre.eg.db
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public |
Mapping table for Danio rerio Gene ID to MeSH
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2023-06-16 |
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goslimmer
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public |
GOSlimmer transforms GO annotations to a slimmed version of GO
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2023-06-16 |
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bioconductor-cobindr
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public |
Finding Co-occuring motifs of transcription factor binding sites
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2023-06-16 |
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bioconductor-mesh.zma.eg.db
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public |
Mapping table for Zea mays Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.oan.eg.db
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public |
Mapping table for Ornithorhynchus anatinus Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.mdo.eg.db
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public |
Mapping table for Monodelphis domestica Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.eco.o157.h7.sakai.eg.db
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public |
Mapping table for Escherichia coli O157:H7 Sakai Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.eco.k12.mg1655.eg.db
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public |
Mapping table for Escherichia coli str K-12 substr. MG1655 Gene ID to MeSH
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2023-06-16 |
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bioconductor-ggtools
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public |
software and data for analyses in genetics of gene expression
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2023-06-16 |
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r-rsnps
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public |
A programmatic interface to various 'SNP' 'datasets' on the web: 'OpenSNP' (<https://opensnp.org>), and 'NBCIs' 'dbSNP' database (<https://www.ncbi.nlm.nih.gov/projects/SNP>). Functions are included for searching for 'NCBI'. For 'OpenSNP', functions are included for getting 'SNPs', and data for 'genotypes', 'phenotypes', annotations, and bulk downloads of data by user.
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2023-06-16 |
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bioconductor-mesh.pab.eg.db
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public |
Mapping table for Pongo abelii Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.mga.eg.db
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public |
Mapping table for Meleagris gallopavo Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.cre.eg.db
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public |
Mapping table for Caenorhabditis remani Gene ID to MeSH
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2023-06-16 |
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sample-sheet
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public |
An Illumina Sample Sheet parsing library
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2023-06-16 |
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bioconductor-gqtlbase
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public |
gQTLBase: infrastructure for eQTL, mQTL and similar studies
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2023-06-16 |
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bioconductor-mesh.dse.eg.db
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public |
Mapping table for Drosophila sechellia Gene ID to MeSH
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2023-06-16 |
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bioconductor-trena
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public |
Fit transcriptional regulatory networks using gene expression, priors, machine learning
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2023-06-16 |
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perl-text-template-simple
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public |
Simple text template engine
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2023-06-16 |
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bioconductor-mesh.sil.eg.db
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public |
Mapping table for Bombyx mori Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.ssc.eg.db
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public |
Mapping table for Sus scrofa Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.sce.s288c.eg.db
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public |
Mapping table for Saccharomyces cerevisiae S288c Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.dmo.eg.db
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public |
Mapping table for Drosophila mojavensis Gene ID to MeSH
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2023-06-16 |
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bioconductor-appreci8r
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public |
appreci8R: an R/Bioconductor package for filtering SNVs and short indels with high sensitivity and high PPV
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2023-06-16 |
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bioconductor-mesh.tbr.9274.eg.db
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public |
Mapping table for Trypanosoma brucei brucei strain 927_4 GUTat10.1 Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.mes.eg.db
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public |
Mapping table for NA Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.ddi.ax4.eg.db
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public |
Mapping table for Dictyostelium discoideum AX4 Gene ID to MeSH
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2023-06-16 |
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bioconductor-methyvim
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public |
Targeted, Robust, and Model-free Differential Methylation Analysis
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2023-06-16 |
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bioconductor-genotypeeval
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public |
QA/QC of a gVCF or VCF file
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2023-06-16 |
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bioconductor-mesh.vvi.eg.db
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public |
Mapping table for Vitis vinifera Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.tgu.eg.db
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public |
Mapping table for Taeniopygia guttata Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.eco.umn026.eg.db
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public |
Mapping table for Escherichia coli UMN026 Gene ID to MeSH
|
2023-06-16 |
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bioconductor-mesh.dya.eg.db
|
public |
Mapping table for Drosophila yakuba Gene ID to MeSH
|
2023-06-16 |
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bioconductor-mesh.db
|
public |
A set of annotation maps describing the entire MeSH
|
2023-06-16 |
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bioconductor-mesh.dvi.eg.db
|
public |
Mapping table for Drosophila virllis Gene ID to MeSH
|
2023-06-16 |
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bioconductor-ggdata
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public |
all 90 hapmap CEU samples, 47K expression, 4mm SNP
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2023-06-16 |
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bioconductor-dsqtl
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public |
dsQTL, data excerpt from Degner et al. 2012 Nature letter
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2023-06-16 |
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r-rtfbs
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public |
Identifies and scores possible Transcription Factor Binding Sites and allows for FDR analysis and pruning. It supports splitting of sequences based on size or a specified GFF, grouping by G+C content, and specification of Markov model order. The heavy lifting is done in C while all results are made available via R.
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2023-06-16 |
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bioconductor-mesh.tgo.me49.eg.db
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public |
Mapping table for Toxoplasma gondii ME49 Gene ID to MeSH
|
2023-06-16 |
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bioconductor-mesh.mml.eg.db
|
public |
Mapping table for Macaca mulatta Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.eco.55989.eg.db
|
public |
Mapping table for Escherichia coli 55989 Gene ID to MeSH
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2023-06-16 |
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bioconductor-mesh.dda.3937.eg.db
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public |
Mapping table for Dickeya dadantii 3937 Gene ID to MeSH
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2023-06-16 |
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bioconductor-geneanswers
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public |
Integrated Interpretation of Genes
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2023-06-16 |
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perl-sys-info-driver-linux
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public |
Linux driver for Sys::Info
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2023-06-16 |
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bioconductor-geuvstore2
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public |
demonstrate storage discipline for eQTL enumerations, revised
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2023-06-16 |
