| Package Name | Access | Summary | Updated |
|---|---|---|---|
| mccortex | public | De novo genome assembly and multisample variant calling | 2025-10-01 |
| plasann | public | A tool for plasmid annotation and visualization. | 2025-10-01 |
| seqwin | public | Ultrafast identification of signature sequences in microbial genomes via minimizer graphs | 2025-10-01 |
| snakemake-interface-common | public | Common functions and classes for Snakemake and its plugins. | 2025-10-01 |
| rnablueprint | public | The RNAblueprint library solves the problem of uniformly sampling RNA/DNA sequences compatible to multiple structural constraints and sequence constraints. | 2025-10-01 |
| demuxem | public | DemuxEM is the demultiplexing module of Pegasus, which works on cell-hashing and nucleus-hashing genomics data. | 2025-10-01 |
| mrbayes_volpiano | public | Bayesian Inference of Phylogeny (Volpiano edition) | 2025-10-01 |
| bioconductor-scdblfinder | public | scDblFinder | 2025-10-01 |
| hyphy | public | An open-source software package for comparative sequence analysis using stochastic evolutionary models. | 2025-10-01 |
| cyvcf2 | public | A cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files. | 2025-10-01 |
| r-dimsum | public | An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies | 2025-10-01 |
| varlociraptor | public | Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control. | 2025-10-01 |
| biobb_mem | public | Biobb_mem is the Biobb module for membrane structure analysis. | 2025-10-01 |
| varpubs | public | Tool for finding PubMed evidence on genetic variants and generating LLM-based summaries | 2025-10-01 |
| snakemake-minimal | public | A popular workflow management system aiming at full in-silico reproducibility. | 2025-10-01 |
| snakemake | public | A popular workflow management system aiming at full in-silico reproducibility. | 2025-10-01 |
| vinalc | public | VinaLC: MPI-accelerated molecular docking program for virtual screening. | 2025-10-01 |
| bioconda-repodata-patches | public | Generate tweaks to index metadata, hosted separately from anaconda.org index. | 2025-10-01 |
| eviann | public | Evidence-based eukaryotic genome annotation software. | 2025-09-30 |
| rnaz | public | predicting structural noncoding RNAs | 2025-09-30 |
| nwalign3 | public | Updated version of nwalign (Needleman-Wunsch global sequence alignment) with Python 3.x compatibility. | 2025-09-30 |
| cellsnp-lite | public | Efficient genotyping bi-allelic SNPs on single cells | 2025-09-30 |
| unimap | public | Unimap is a fork of minimap2 optimized for assembly-to-reference alignment. | 2025-09-30 |
| segemehl | public | Short read mapping with gaps | 2025-09-30 |
| nanomotif | public | Identifying methlyation motifs in nanopore data. | 2025-09-30 |
