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bioconductor-refplus
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public |
A function set for the Extrapolation Strategy (RMA+) and Extrapolation Averaging (RMA++) methods.
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2025-04-22 |
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bioconductor-ggtools
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public |
software and data for analyses in genetics of gene expression
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2025-04-22 |
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bioconductor-ggbase
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public |
GGBase infrastructure for genetics of gene expression package GGtools
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2025-04-22 |
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bioconductor-gewist
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public |
Gene Environment Wide Interaction Search Threshold
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2025-04-22 |
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bioconductor-globalancova
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public |
Global test for groups of variables via model comparisons
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2025-04-22 |
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bioconductor-gmrp
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public |
GWAS-based Mendelian Randomization and Path Analyses
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2025-04-22 |
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bioconductor-gofunction
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public |
GO-function: deriving biologcially relevant functions from statistically significant functions
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2025-04-22 |
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kfoots
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public |
The package provides methods for fitting multivariate count data with a mixture model or a hidden markov model. Each mixture component is a negative multivariate random variable and an EM algorithm is used to maximize the likelihood.
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2025-04-22 |
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bioconductor-bamsignals
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public |
Extract read count signals from bam files
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2025-04-22 |
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bioconductor-brain
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public |
Baffling Recursive Algorithm for Isotope distributioN calculations
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2025-04-22 |
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r-seurat
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public |
A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, and Butler A and Satija R (2017) <doi:10.1101/164889> for more details.
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2025-04-22 |
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refseq_masher
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public |
refseq_masher finds what NCBI RefSeq genomes match or are contained within your sequence data using Mash
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2025-04-22 |
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kodoja
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public |
Kodoja: identifying viruses from plant RNA sequencing data
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2025-04-22 |
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rebaler
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public |
Reference-based long read assemblies of bacterial genomes
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2025-04-22 |
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clonalframeml
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public |
Efficient inferencing of recombination in bacterial genomes
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2025-04-22 |
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riboseq-rust
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public |
Ribo-seq Unit Step Transformation. Tools to characterise the determinants of ribosome profiling read density across mRNA. May be used to examine relative decoding rates and and for quality assessment
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2025-04-22 |
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bioconductor-variancepartition
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public |
Quantify and interpret drivers of variation in multilevel gene expression experiments
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2025-04-22 |
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bioconductor-starbiotrek
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public |
StarBioTrek
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2025-04-22 |
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bioconductor-spidermir
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public |
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
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2025-04-22 |
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bioconductor-tcgabiolinks
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public |
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
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2025-04-22 |
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umitools
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public |
A toolset for handling sequencing data with unique molecular identifiers (UMIs)
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2025-04-22 |
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bioconductor-basecallqc
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public |
Working with Illumina Basecalling and Demultiplexing input and output files
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2025-04-22 |
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bioconductor-dss
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public |
Dispersion shrinkage for sequencing data
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2025-04-22 |
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bioconductor-imas
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public |
Integrative analysis of Multi-omics data for Alternative Splicing
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2025-04-22 |
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perl-moosex-types-path-tiny
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public |
MooseX::Types::Path::Tiny - Path::Tiny types and coercions for Moose
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2025-04-22 |
