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python-intervaltree
|
public |
Faster than intervaltree_bio
|
2025-04-22 |
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python-sortedcontainers
|
public |
sorted collections library, written in pure-Python, and fast as C-extensions
|
2025-04-22 |
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minorseq
|
public |
Minor Variant Calling and Phasing Tools
|
2025-04-22 |
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gffmunger
|
public |
Munges GFF3 files exported from Chado database to make them suitable for loading into WebApollo
|
2025-04-22 |
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bioconductor-hiccompare
|
public |
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
|
2025-04-22 |
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neurodocker
|
public |
Neurodocker is a command-line program that generates custom Dockerfiles and Singularity recipes for neuroimaging and minifies existing containers.
|
2025-04-22 |
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pb-falcon
|
public |
FALCON/Unzip tool-suite (originally by Jason Chin)
|
2025-04-22 |
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perl-unicode-utf8
|
public |
Encoding and decoding of UTF-8 encoding form
|
2025-04-22 |
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pbmm2
|
public |
A minimap2 frontend for PacBio native data formats
|
2025-04-22 |
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plasflow
|
public |
PlasFlow - predicting plasmid sequences in metagenomic data
|
2025-04-22 |
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sumaclust
|
public |
Sumaclust clusters sequences in a way that is fast and exact at the same time, using the same clustering algorithm as UCLUST and CD-HIT. For more information see url.
|
2025-04-22 |
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vargeno
|
public |
Fast SNP genotyping tool for whole genome sequence data and large SNP database.
|
2025-04-22 |
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python-consensuscore2
|
public |
PacBio Arrow Consensus library for Sequel data
|
2025-04-22 |
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cnvetti
|
public |
CNVetti is a CNV caller from HTS data.
|
2025-04-22 |
|
ditasic
|
public |
DiTASiC is designed as a comprehensive approach for abundance estimation and differential abundance assessment of individual taxa in metagenomics samples.
|
2025-04-22 |
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pbccs
|
public |
pbccs - Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
|
2025-04-22 |
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banner
|
public |
BANNER is a tool that lives inside HULK and aims to make sense of hulk histosketches.
|
2025-04-22 |
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ksw
|
public |
Ksw: (interactive) smith-waterman in C
|
2025-04-22 |
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bioconductor-zinbwave
|
public |
Zero-Inflated Negative Binomial Model for RNA-Seq Data
|
2025-04-22 |
|
tandem-genotypes
|
public |
Find tandem repeat length changes, from "long" DNA reads aligned to a genome
|
2025-04-22 |
|
perl-bio-tools-run-alignment-tcoffee
|
public |
Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the TCoffee program
|
2025-04-22 |
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perl-bio-tools-phylo-paml
|
public |
Parses output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00
|
2025-04-22 |
|
perl-bio-tools-run-alignment-clustalw
|
public |
Object for the calculation of a multiple sequence alignment from a set of unaligned sequences or alignments using the Clustalw program
|
2025-04-22 |
|
perl-bio-coordinate
|
public |
Methods for dealing with genomic coordinates.
|
2025-04-22 |
|
pb-dazzler
|
public |
The Dresden Assembler suite -- Pacific Biosciences forks
|
2025-04-22 |
