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slicedimage
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public |
Python module to access sliced imaging data
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2025-04-22 |
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regional
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public |
simple manipulation and display of spatial regions in python
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2025-04-22 |
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perl-string-truncate
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public |
a module for when strings are too long to be displayed in...
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2025-04-22 |
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perl-string-rewriteprefix
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public |
rewrite strings based on a set of known prefixes
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2025-04-22 |
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r-raceid
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public |
Application of 'RaceID' allows inference of cell types and prediction of lineage trees by the StemID2 algorithm.
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2025-04-22 |
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perl-moosex-types-stringlike
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public |
Moose type constraints for strings or string-like objects
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2025-04-22 |
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showit
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public |
simple and sensible display of images in python
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2025-04-22 |
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r-fateid
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public |
Application of 'FateID' allows computation and visualization of cell fate bias for multi-lineage single cell transcriptome data. Herman, J.S., Sagar, Grün D. (2017) <DOI:10.1038/nmeth.4662>.
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2025-04-22 |
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perl-carp-clan
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public |
Report errors from perspective of caller of a "clan" of modules
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2025-04-22 |
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perl-sub-exporter-formethods
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public |
helper routines for using Sub::Exporter to build methods
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2025-04-22 |
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perl-moosex-role-parameterized
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public |
Moose roles with composition parameters
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2025-04-22 |
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perl-test-exec
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public |
Test that some code calls exec without terminating testing
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2025-04-22 |
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perl-slurp
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public |
Slurp entire files into variables
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2025-04-22 |
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perl-sub-info
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public |
Tool for inspecting subroutines.
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2025-04-22 |
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perl-module-pluggable
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public |
automatically give your module the ability to have plugins
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2025-04-22 |
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perl-return-multilevel
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public |
return across multiple call levels
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2025-04-22 |
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perl-module-util
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public |
Module name tools and transformations
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2025-04-22 |
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perl-import-into
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public |
Import packages into other packages
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2025-04-22 |
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r-fastqcr
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public |
'FASTQC' is the most widely used tool for evaluating the quality of high throughput sequencing data. It produces, for each sample, an html report and a compressed file containing the raw data. If you have hundreds of samples, you are not going to open up each 'HTML' page. You need some way of looking at these data in aggregate. 'fastqcr' Provides helper functions to easily parse, aggregate and analyze 'FastQC' reports for large numbers of samples. It provides a convenient solution for building a 'Multi-QC' report, as well as, a 'one-sample' report with result interpretations.
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2025-04-22 |
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perl-moosex-role-withoverloading
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public |
(DEPRECATED) Roles which support overloading
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2025-04-22 |
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perl-env
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public |
perl module that imports environment variables as scalars or arrays
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2025-04-22 |
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methylextract
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public |
High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data
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2025-04-22 |
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r-intego
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public |
An unsupervised gene clustering algorithm based on the integration of external biological knowledge, such as Gene Ontology annotations, into expression data.
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2025-04-22 |
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pb-assembly
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public |
Meta-package for Falcon/Unzip tool-suite (originally by Jason Chin)
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2025-04-22 |
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perl-biox-seq
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public |
a basic but fast biological sequence object and associated parsers
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2025-04-22 |
