| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-glmgampoi | public | Fit a Gamma-Poisson Generalized Linear Model | 2025-04-27 |
| melon | public | Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes | 2025-04-27 |
| recentrifuge | public | Robust comparative analysis and contamination removal for metagenomics. | 2025-04-27 |
| bubblegun | public | BubbleGun is a tool for detecting bubbles and superbubbles in GFA graphs, and reports them and their nested structures. | 2025-04-27 |
| netsyn | public | NetSyn is a tool to detect conserved genomic contexts (i.e. synteny conservation) among a list of protein targets. | 2025-04-27 |
| eukfinder | public | Eukfinder is a tool for detecting eukaryotic sequences in metagenomic data. | 2025-04-26 |
| jvarkit | public | Java utilities for Bioinformatics. | 2025-04-25 |
| esme_netcdf-fortran_psmpi_5_10_0 | public | NetCDF-Fortran - netCDF interface for Fortran | 2025-04-25 |
| esme_psmpi_5_10_0 | public | Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support. | 2025-04-25 |
| esme_hdf5_psmpi_5_10_0 | public | HDF5 - Hierarchical Data Format 5 | 2025-04-25 |
| esme_pnetcdf_psmpi_5_10_0 | public | PnetCDF - Parallel netCDF | 2025-04-25 |
| esme_omb_psmpi_5_10_0 | public | OSU Micro Benchmarks | 2025-04-25 |
| esme_netcdf-c_psmpi_5_10_0 | public | NetCDF-C - netCDF interface for C | 2025-04-25 |
| esme_pio_psmpi_5_10_0 | public | ParallelIO - High-level parallel I/O library | 2025-04-25 |
| esme_esmf_psmpi_5_10_0 | public | ESMF - Earth System Modeling Framework | 2025-04-25 |
| minipileup | public | Minipileup is a simple pileup-based variant caller | 2025-04-25 |
| r-acidcli | public | Interative R command line interface toolkit for Acid Genomics packages. | 2025-04-25 |
| dashing2 | public | A fast toolkit for k-mer and minimizer encoding, sketching, comparison, and indexing. | 2025-04-25 |
| cd-hit | public | Clusters and compares protein or nucleotide sequences | 2025-04-24 |
| spacerplacer | public | SpacerPlacer is a powerful software for reconstructing ancestral CRISPR spacer arrays. | 2025-04-24 |
| sistr_cmd | public | Salmonella In Silico Typing Resource (SISTR) commandline tool for serovar prediction | 2025-04-24 |
| r-acidgenerics | public | S4 generic functions for Acid Genomics packages. | 2025-04-24 |
| r-acidbase | public | Low-level base functions imported by Acid Genomics packages. | 2025-04-24 |
| perl-html-parser | public | HTML parser class | 2025-04-24 |
| bellavista | public | Python package for interactive visualization of imaging-based spatial transcriptomics. | 2025-04-24 |
