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minipileup

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Minipileup is a simple pileup-based variant caller

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::minipileup

Usage Tracking

1.4b
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

Minipileup is a simple pileup-based variant caller. It takes a reference FASTA and one or multiple alignment BAM as input, and outputs a multi-sample VCF along with allele counts.

About

Summary

Minipileup is a simple pileup-based variant caller

Last Updated

Apr 25, 2025 at 08:56

License

MIT

Total Downloads

301

Supported Platforms

linux-64
macOS-64