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mtbseq
|
public |
Pipeline for WGS analysis of M. tuberculosis
|
2025-05-07 |
|
perl-crypt-openssl-rsa
|
public |
RSA encoding and decoding, using the openSSL libraries
|
2025-05-07 |
|
fast2q
|
public |
A Python3 program that counts sequence occurrences in FASTQ files.
|
2025-05-07 |
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treesapp
|
public |
TreeSAPP is a functional and taxonomic annotation tool for microbial genomes and proteins
|
2025-05-07 |
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bio
|
public |
Command-line utilities to make bioinformatics explorations more enjoyable.
|
2025-05-07 |
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gprofiler-official
|
public |
Functional enrichment analysis and more via the g:Profiler toolkit
|
2025-05-07 |
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bioconductor-metmashr
|
public |
Metabolite Mashing with R
|
2025-05-07 |
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flair
|
public |
Correction, isoform definition, and alternative splicing analysis of noisy reads (ONT and PacBio).
|
2025-05-07 |
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flye
|
public |
A fast and accurate de novo assembler for single molecule sequencing reads using repeat graphs.
|
2025-05-07 |
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gb-io
|
public |
A Python interface to gb-io, a fast GenBank parser and serializer written in Rust.
|
2025-05-06 |
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phipack
|
public |
Simple, rapid, and statistically efficient test for recombination.
|
2025-05-06 |
|
bwapy
|
public |
Bwapy provides python wrappers for bwa.
|
2025-05-06 |
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pixelator
|
public |
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.
|
2025-05-05 |
|
capcruncher
|
public |
An end-to-end solution for processing Capture-C, Tri-C and Tiled-C data.
|
2025-05-03 |
|
regtools
|
public |
Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context.
|
2025-05-03 |
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subread
|
public |
High-performance read alignment, quantification, and mutation discovery.
|
2025-05-03 |
|
oligon-design
|
public |
Simple and versatile approach to design specific oligonucleotides from large environmental datasets
|
2025-05-03 |
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recur
|
public |
Detect recurrent amino-acid substitutions from multiple-sequence alignments.
|
2025-05-02 |
|
kernel_density_plots
|
public |
Python tool for generating SNP density and closest neighbor plots from aligned SNP FASTA files.
|
2025-05-02 |
|
bioconductor-structtoolbox
|
public |
Data processing & analysis tools for Metabolomics and other omics
|
2025-05-02 |
|
frogs
|
public |
FROGS is a workflow designed to metabarcoding sequence analysis
|
2025-05-02 |
|
aniclustermap
|
public |
A tool for drawing ANI clustermap between all-vs-all microbial genomes
|
2025-05-02 |
|
mogaaap
|
public |
MoGAAAP: Modular Genome Assembly, Annotation and quality Assessment Pipeline
|
2025-05-02 |
|
viguno
|
public |
Lookup OMIM genes and HPO terms and compute similarities.
|
2025-05-02 |
|
varfish-server-worker
|
public |
Rust-based tool for the heavy lifting in varfish-server.
|
2025-05-02 |
