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Pipeline for WGS analysis of M. tuberculosis

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.0.3
  • noarch v1.1.0

conda install

To install this package run one of the following:
conda install bioconda::mtbseq
conda install bioconda/label/cf201901::mtbseq

Description

MTBseq is a semi-automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from Illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates


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