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bioconductor-rtcga.mirnaseq
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public |
miRNASeq datasets from The Cancer Genome Atlas Project
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2024-12-17 |
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bioconductor-rnaseqdata.hnrnpc.bam.chr14
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public |
Aligned reads from RNAseq experiment: Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cells
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2024-12-17 |
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bioconductor-breastcancernki
|
public |
Genexpression dataset published by van't Veer et al. [2002] and van de Vijver et al. [2002] (NKI).
|
2024-12-17 |
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bioconductor-m3dexampledata
|
public |
M3Drop Example Data
|
2024-12-17 |
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bioconductor-rheumaticconditionwollbold
|
public |
Normalized gene expression dataset published by Wollbold et al. [2009] (WOLLBOLD).
|
2024-12-17 |
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bioconductor-scannotatr.models
|
public |
Pretrained models for scAnnotatR package
|
2024-12-17 |
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bioconductor-bader
|
public |
Bayesian Analysis of Differential Expression in RNA Sequencing Data
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2024-12-17 |
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bioconductor-garfield
|
public |
GWAS Analysis of Regulatory or Functional Information Enrichment with LD correction
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2024-12-17 |
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bioconductor-graphalignment
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public |
GraphAlignment
|
2024-12-17 |
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bioconductor-hdtd
|
public |
Statistical Inference about the Mean Matrix and the Covariance Matrices in High-Dimensional Transposable Data (HDTD)
|
2024-12-17 |
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bioconductor-aseb
|
public |
Predict Acetylated Lysine Sites
|
2024-12-17 |
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bioconductor-gpa
|
public |
GPA (Genetic analysis incorporating Pleiotropy and Annotation)
|
2024-12-17 |
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bioconductor-icare
|
public |
Individualized Coherent Absolute Risk Estimation (iCARE)
|
2024-12-17 |
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bioconductor-hibag
|
public |
HLA Genotype Imputation with Attribute Bagging
|
2024-12-17 |
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bioconductor-chopsticks
|
public |
The 'snp.matrix' and 'X.snp.matrix' Classes
|
2024-12-17 |
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bioconductor-hireewas
|
public |
Detection of cell-type-specific risk-CpG sites in epigenome-wide association studies
|
2024-12-17 |
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3seq
|
public |
3SEQ tests all sequence triplets in an alignment for a mosaic recombination signal.
|
2024-12-17 |
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bioconductor-eds
|
public |
eds: Low-level reader for Alevin EDS format
|
2024-12-17 |
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bioconductor-dnabarcodes
|
public |
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments
|
2024-12-16 |
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bioconductor-bufferedmatrix
|
public |
A matrix data storage object held in temporary files
|
2024-12-16 |
|
bioconductor-twoddpcr
|
public |
Classify 2-d Droplet Digital PCR (ddPCR) data and quantify the number of starting molecules
|
2024-12-16 |
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survindel2
|
public |
A CNV caller for Illumina paired-end WGS data.
|
2024-12-16 |
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bioconductor-exploremodelmatrix
|
public |
Graphical Exploration of Design Matrices
|
2024-12-16 |
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bioconductor-sevenbridges
|
public |
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R
|
2024-12-16 |
|
bioconductor-viper
|
public |
Virtual Inference of Protein-activity by Enriched Regulon analysis
|
2024-12-16 |
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rhocall
|
public |
Call regions of homozygosity and make tentative UPD calls.
|
2024-12-16 |
|
pbfusion
|
public |
Fusion gene detection tool for PacBio Iso-Seq data
|
2024-12-16 |
|
bioconductor-spem
|
public |
S-system parameter estimation method
|
2024-12-16 |
|
bioconductor-geneexpressionsignature
|
public |
Gene Expression Signature based Similarity Metric
|
2024-12-16 |
|
bioconductor-affycomp
|
public |
Graphics Toolbox for Assessment of Affymetrix Expression Measures
|
2024-12-16 |
|
bioconductor-cghbase
|
public |
CGHbase: Base functions and classes for arrayCGH data analysis.
|
2024-12-16 |
|
bioconductor-convert
|
public |
Convert Microarray Data Objects
|
2024-12-16 |
|
r-bisquerna
|
public |
Provides tools to accurately estimate cell type abundances from heterogeneous bulk expression.
|
2024-12-16 |
|
ale-core
|
public |
ALE: Assembly Likelihood Estimator. Core C implemented scoring programs only without supplementary plotting scripts.
|
2024-12-16 |
|
hifiasm
|
public |
Haplotype-resolved assembler for accurate Hifi reads.
|
2024-12-16 |
|
ivar
|
public |
iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.
|
2024-12-16 |
|
bioconductor-plgem
|
public |
Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM)
|
2024-12-16 |
|
bioconductor-bluster
|
public |
Clustering Algorithms for Bioconductor
|
2024-12-16 |
|
bioconductor-annotationtools
|
public |
Annotate microarrays and perform cross-species gene expression analyses using flat file databases
|
2024-12-16 |
|
perl-moosex-role-withoverloading
|
public |
(DEPRECATED) Roles which support overloading
|
2024-12-16 |
|
bioconductor-randpack
|
public |
Randomization routines for Clinical Trials
|
2024-12-16 |
|
perl-statistics-r
|
public |
No Summary
|
2024-12-16 |
|
duplomap
|
public |
Tool designed to improve precision and recall of long-read alignments in segmental duplications.
|
2024-12-16 |
|
igphyml
|
public |
IgPhyML is a program designed to build phylogenetic trees and test evolutionary hypotheses regarding B cell affinity maturation.
|
2024-12-16 |
|
bioconductor-gsealm
|
public |
Linear Model Toolset for Gene Set Enrichment Analysis
|
2024-12-16 |
|
contammix
|
public |
estimation of mtDNA contamination from a set of potential contaminant genomes.
|
2024-12-16 |
|
perl-cgi
|
public |
A generic file fetching mechanism
|
2024-12-16 |
|
bioconductor-massir
|
public |
massiR: MicroArray Sample Sex Identifier
|
2024-12-16 |
|
bioconductor-biodbchebi
|
public |
biodbChebi, a library for connecting to the ChEBI Database
|
2024-12-16 |
|
bioconductor-spktools
|
public |
Methods for Spike-in Arrays
|
2024-12-16 |
