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bioconductor-bioimagedbs
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public |
Bio- and biomedical imaging dataset for machine learning and deep learning (for ExperimentHub)
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2024-12-22 |
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bioconductor-debcam
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public |
Deconvolution by Convex Analysis of Mixtures
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2024-12-22 |
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bioconductor-ipo
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public |
Automated Optimization of XCMS Data Processing parameters
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2024-12-22 |
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bioconductor-crisprscoredata
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public |
Pre-trained models for the crisprScore package
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2024-12-22 |
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bioconductor-curatedadiporna
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public |
A Curated RNA-Seq Dataset of MDI-induced Differentiated Adipocytes (3T3-L1)
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2024-12-22 |
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bioconductor-topdownrdata
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public |
Example Files for the topdownr R Package
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2024-12-22 |
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bioconductor-harmonizedtcgadata
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public |
Processed Harmonized TCGA Data of Five Selected Cancer Types
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2024-12-22 |
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bioconductor-toast
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public |
Tools for the analysis of heterogeneous tissues
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2024-12-22 |
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bioconductor-macsr
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public |
MACS: Model-based Analysis for ChIP-Seq
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2024-12-22 |
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bioconductor-qplexdata
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public |
Data accompanying qPLEXanalyzer package
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2024-12-22 |
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bioconductor-singlecellexperiment
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public |
S4 Classes for Single Cell Data
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2024-12-22 |
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bioconductor-tidysummarizedexperiment
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public |
Brings SummarizedExperiment to the Tidyverse
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2024-12-22 |
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bioconductor-msmstests
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public |
LC-MS/MS Differential Expression Tests
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2024-12-22 |
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bioconductor-simbenchdata
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public |
SimBenchData: a collection of 35 single-cell RNA-seq data covering a wide range of data characteristics
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2024-12-22 |
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bioconductor-betahmm
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public |
A Hidden Markov Model Approach for Identifying Differentially Methylated Sites and Regions for Beta-Valued DNA Methylation Data
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2024-12-22 |
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bioconductor-dapar
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public |
Tools for the Differential Analysis of Proteins Abundance with R
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2024-12-22 |
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bioconductor-fission
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public |
RangedSummarizedExperiment for time course RNA-Seq of fission yeast in response to stress, by Leong et al., Nat Commun 2014.
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2024-12-22 |
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bioconductor-msdatahub
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public |
Mass Spectrometry Data on ExperimentHub
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2024-12-22 |
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bioconductor-msstatsqcgui
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public |
A graphical user interface for MSstatsQC package
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2024-12-22 |
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bioconductor-plyxp
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public |
Data masks for SummarizedExperiment enabling dplyr-like manipulation
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2024-12-22 |
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bioconductor-singlemoleculefootprintingdata
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public |
Data supporting the SingleMoleculeFootprinting pkg
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2024-12-22 |
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bioconductor-synapterdata
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public |
Data accompanying the synapter package
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2024-12-22 |
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bioconductor-lrcelltypemarkers
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public |
Marker gene information for LRcell R Bioconductor package
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2024-12-22 |
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bioconductor-biotmle
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public |
Targeted Learning with Moderated Statistics for Biomarker Discovery
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2024-12-22 |
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r-george
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public |
geoRge, a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
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2024-12-22 |
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bioconductor-marinerdata
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public |
ExperimentHub data for the mariner package
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2024-12-22 |
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bioconductor-isobayes
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public |
IsoBayes: Single Isoform protein inference Method via Bayesian Analyses
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2024-12-22 |
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bioconductor-sesamedata
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public |
Supporting Data for SeSAMe Package
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2024-12-22 |
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bioconductor-faahko
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public |
Saghatelian et al. (2004) FAAH knockout LC/MS data
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2024-12-22 |
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bioconductor-bettr
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public |
A Better Way To Explore What Is Best
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2024-12-22 |
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bioconductor-nullrangesdata
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public |
ExperimentHub datasets for the nullranges package
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2024-12-22 |
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bioconductor-vsclust
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public |
Feature-based variance-sensitive quantitative clustering
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2024-12-22 |
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bioconductor-planttfhunter
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public |
Identification and classification of plant transcription factors
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2024-12-22 |
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bioconductor-benchmarkfdrdata2019
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public |
Data and Benchmarking Results from Korthauer and Kimes et al. (2019)
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2024-12-22 |
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bioconductor-survclust
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public |
Identification Of Clinically Relevant Genomic Subtypes Using Outcome Weighted Learning
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2024-12-22 |
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bioconductor-oligoclasses
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public |
Classes for high-throughput arrays supported by oligo and crlmm
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2024-12-22 |
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bioconductor-spqn
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public |
Spatial quantile normalization
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2024-12-22 |
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bioconductor-pairkat
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public |
PaIRKAT
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2024-12-22 |
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bioconductor-gdr
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public |
Umbrella package for R packages in the gDR suite
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2024-12-22 |
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bioconductor-stabmap
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public |
Stabilised mosaic single cell data integration using unshared features
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2024-12-22 |
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bioconductor-made4
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public |
Multivariate analysis of microarray data using ADE4
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2024-12-22 |
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r-minems2
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public |
Mine MS-MS spectra using a frequent usbgraph mining approach.
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2024-12-22 |
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bioconductor-combi
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public |
Compositional omics model based visual integration
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2024-12-22 |
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bioconductor-singler
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public |
Reference-Based Single-Cell RNA-Seq Annotation
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2024-12-22 |
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bioconductor-cmapr
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public |
CMap Tools in R
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2024-12-22 |
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bioconductor-topdownr
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public |
Investigation of Fragmentation Conditions in Top-Down Proteomics
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2024-12-22 |
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r-alakazam
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public |
Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017) <doi:10.1093/bioinformatics/btv359>, Stern, Yaari and Vander Heiden, et al (2014) <doi:10.1126/scitranslmed.3008879>.
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2024-12-22 |
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bioconductor-pcatools
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public |
PCAtools: Everything Principal Components Analysis
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2024-12-22 |
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bioconductor-multidataset
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public |
Implementation of MultiDataSet and ResultSet
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2024-12-22 |
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bioconductor-qplexanalyzer
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public |
Tools for quantitative proteomics data analysis
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2024-12-22 |
