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earlgrey
|
public |
Earl Grey: A fully automated TE curation and annotation pipeline
|
2025-04-22 |
|
bamdash
|
public |
Aggregate pathogen NGS results into an interactive plot
|
2025-04-22 |
|
syngap
|
public |
SynGAP: Synteny-based Gene structure Annotation Polisher
|
2025-04-22 |
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taxmyphage
|
public |
Script to assign taxonomy to a bacteriophage at the genus and species level
|
2025-04-22 |
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auriclass
|
public |
AuriClass is a tool for quickly predicting the clade of a Candida auris genome.
|
2025-04-22 |
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rapgreen
|
public |
Manipulate and annotate phylogenetic trees
|
2025-04-22 |
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redundans
|
public |
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
|
2025-04-22 |
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nii2dcm
|
public |
nii2dcm: NIfTI to DICOM creation with Python
|
2025-04-22 |
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assembly_finder
|
public |
Snakemake-powered cli pipeline to download genomes with NCBI datasets
|
2025-04-22 |
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orthoflow
|
public |
Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.
|
2025-04-22 |
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rabies
|
public |
RABIES: Rodent Automated Bold Improvement of EPI Sequences.
|
2025-04-22 |
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hybracter
|
public |
An automated long-read first bacterial genome assembly pipeline.
|
2025-04-22 |
|
corgi
|
public |
Classifier for ORganelle Genomes Inter alia
|
2025-04-22 |
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gdmicro
|
public |
GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data
|
2025-04-22 |
|
ms2rescore
|
public |
Modular and user-friendly platform for AI-assisted rescoring of peptide identifications
|
2025-04-22 |
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aspera-cli
|
public |
Command Line Interface for IBM Aspera products.
|
2025-04-22 |
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vvv2_display
|
public |
Creates png image file with all [vardict] variants proportions alongside genome/assembly with annotations from [vadr].
|
2025-04-22 |
|
vcf2cytosure
|
public |
Convert VCF with structural variations to CytoSure format
|
2025-04-22 |
|
submission-excel2xml
|
public |
Generate DRA metadata XML files from Excel spreadsheet
|
2025-04-22 |
|
neoloop
|
public |
Predict neo-loops induced by structural variations
|
2025-04-22 |
|
scrnasim-toolz
|
public |
Tools used by scRNAsim workflow.
|
2025-04-22 |
|
customtkinter
|
public |
Create modern looking GUIs with Python
|
2025-04-22 |
|
tadlib
|
public |
A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
|
2025-04-22 |
|
pypolca
|
public |
Standalone Python re-implementation of the POLCA polisher from MaSuRCA
|
2025-04-22 |
|
seqstr
|
public |
Lightweight tool to compile simple string input into long genomic sequences
|
2025-04-22 |
