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insilicosv
|
public |
Simulator for complex structural variants
|
2025-04-22 |
|
bioconductor-tsar
|
public |
Thermal Shift Analysis in R
|
2025-04-22 |
|
bioconductor-dcats
|
public |
Differential Composition Analysis Transformed by a Similarity matrix
|
2025-04-22 |
|
bioconductor-clustirr
|
public |
Clustering of immune receptor repertoires
|
2025-04-22 |
|
bioconductor-compspot
|
public |
compSPOT: Tool for identifying and comparing significantly mutated genomic hotspots
|
2025-04-22 |
|
bioconductor-biocartaimage
|
public |
BioCarta Pathway Images
|
2025-04-22 |
|
bioconductor-plasmut
|
public |
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic
|
2025-04-22 |
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shortseq
|
public |
\ ShortSeqs are compact and efficient Python objects that hold short sequences while using up to 73% less memory compared to built-in types. They have a pre-computed hash value, can be compared for equality, and are easily converted back to the original sequence string.
|
2025-04-22 |
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nextclade2
|
public |
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
|
2025-04-22 |
|
poly-qtlseq
|
public |
PolyploidQtlSeq is a program that extends QTL-seq for polyploid F1 populations.
|
2025-04-22 |
|
hifihla
|
public |
An HLA star-calling tool for PacBio HiFi data types
|
2025-04-22 |
|
lrsim
|
public |
Simulator for 10X Genomics Linked Reads
|
2025-04-22 |
|
sequenoscope
|
public |
sequenoscope is a versatile bioinformatic pipeline for the analysis of sequencing data.
|
2025-04-22 |
|
pymochi
|
public |
Neural networks to quantify energies, energetic couplings, epistasis and allostery from deep mutational scanning data
|
2025-04-22 |
|
slow5curl
|
public |
Tool for accessing remote BLOW5 files.
|
2025-04-22 |
|
dodge
|
public |
Dynamic Outbreak Detection for Genomic Epidemiology. Automated point source bacterial outbreak detection using cumulative long term genomic surveillance.
|
2025-04-22 |
|
boms
|
public |
Cell Segmentation for Spatial Transcriptomics Data using BOMS
|
2025-04-22 |
|
hpcblast
|
public |
A wrapper for NCBI-BLAST+ suite which provides a simple and efficient method to accelerate the blast search
|
2025-04-22 |
|
peaks2utr
|
public |
A robust, parallelized Python CLI for annotating three_prime_UTR
|
2025-04-22 |
|
reneo
|
public |
Reneo: Unraveling Viral Genomes from Metagenomes
|
2025-04-22 |
|
bedgovcf
|
public |
A simple tool to convert BED files to VCF files
|
2025-04-22 |
|
tides-ml
|
public |
Tool for ORF-calling and ORF-classification using ML approaches.
|
2025-04-22 |
|
mtm-align
|
public |
Align multiple protein structures
|
2025-04-22 |
|
pytrf
|
public |
a fast Python package for finding tandem repeat sequences
|
2025-04-22 |
|
orthofisher
|
public |
Orthofisher is a broadly applicable tool for automated gene identification and retrieval.
|
2025-04-22 |
