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orthanq
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public |
Uncertainty aware HLA typing and general haplotype quantification.
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2025-09-26 |
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clustalo
|
public |
Latest version of Clustal: a multiple sequence alignment program for DNA or proteins
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2025-09-26 |
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mehari
|
public |
VEP-like tool for sequence ontology and HGVS annotation of VCF files written in Rust.
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2025-09-26 |
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emboss
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public |
The European Molecular Biology Open Software Suite
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2025-09-26 |
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consel
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public |
CONSEL calculates the probability value (i.e., p-value) to assess the confidence in the selection problem. Although CONSEL is applicable to any selection problem, it is mainly designed for the phylogenetic tree selection
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2025-09-26 |
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lsabgc
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public |
lsaBGC-Pan - refined workflow for pan-BGC-omic evolutionary investigations.
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2025-09-26 |
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pybedlite
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public |
Lightweight python classes for interfacing with bed intervals.
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2025-09-26 |
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pybwa
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public |
Pybwa is a python module that makes it easy to align sequence data. It is a lightweight wrapper of bwa.
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2025-09-26 |
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pm4ngs
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public |
PM4NGS generates a standard organizational structure for Next Generation Sequencing (ngs) data analysis.
|
2025-09-26 |
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bioconda-repodata-patches
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public |
Generate tweaks to index metadata, hosted separately from anaconda.org index.
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2025-09-26 |
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pharokka
|
public |
Fast Phage Annotation Program
|
2025-09-25 |
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kmc
|
public |
Tools for efficient k-mer counting and filtering of reads based on k-mer content.
|
2025-09-25 |
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snakemake
|
public |
A popular workflow management system aiming at full in-silico reproducibility.
|
2025-09-25 |
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vcfsim
|
public |
Script for generating simulated VCF's leveraging a coalescent simulating backend.
|
2025-09-25 |
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snakemake-minimal
|
public |
A popular workflow management system aiming at full in-silico reproducibility.
|
2025-09-25 |
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bgen-cpp
|
public |
Reference implementation of the BGEN format, written in C++
|
2025-09-25 |
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egglib
|
public |
Evolutionary Genetics and Genomics Library. EggLib is a C++/Python library and program package for evolutionary genetics and genomics. Main features are sequence data management, sequence polymorphism analysis, and coalescent simulations. EggLib is a flexible Python module with a performant underlying C++ library and allows fast and intuitive development of Python programs and scripts.
|
2025-09-25 |
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gnuplot-py
|
public |
No Summary
|
2025-09-25 |
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soapdenovo2-gapcloser
|
public |
a tool named GapCloser for SOAPdenovo.
|
2025-09-25 |
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piper
|
public |
A lightweight python toolkit for gluing together restartable, robust command line pipelines.
|
2025-09-25 |
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amiga
|
public |
Analysis of Microbial Growth Assays
|
2025-09-25 |
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paraviewer
|
public |
Automated visualization generator for Paraphase HiFi analysis tool
|
2025-09-25 |
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zol
|
public |
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters.
|
2025-09-25 |
|
ngs-bits
|
public |
Short-read sequencing tools.
|
2025-09-25 |
|
cenmap
|
public |
A centromere mapping and annotation pipeline for T2T human and primate genome assemblies implemented in Snakemake.
|
2025-09-25 |
