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bioconductor-mcsea
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public |
Methylated CpGs Set Enrichment Analysis
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2025-03-25 |
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bioconductor-maser
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public |
Mapping Alternative Splicing Events to pRoteins
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2025-03-25 |
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bioconductor-genestructuretools
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public |
Tools for spliced gene structure manipulation and analysis
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2025-03-25 |
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bioconductor-dmrforpairs
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public |
DMRforPairs: identifying Differentially Methylated Regions between unique samples using array based methylation profiles
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2025-03-25 |
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bioconductor-comet
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public |
coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns
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2025-03-25 |
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bioconductor-genotypeeval
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public |
QA/QC of a gVCF or VCF file
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2025-03-25 |
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bioconductor-erma
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public |
epigenomic road map adventures
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2025-03-25 |
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bioconductor-ga4ghshiny
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public |
Shiny application for interacting with GA4GH-based data servers
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2025-03-25 |
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bioconductor-ga4ghclient
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public |
A Bioconductor package for accessing GA4GH API data servers
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2025-03-25 |
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bioconductor-funcisnp
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public |
Integrating Functional Non-coding Datasets with Genetic Association Studies to Identify Candidate Regulatory SNPs
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2025-03-25 |
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bioconductor-dominoeffect
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public |
Identification and Annotation of Protein Hotspot Residues
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2025-03-25 |
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bioconductor-cnvrd2
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public |
CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data.
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2025-03-25 |
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bioconductor-karyoploter
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public |
Plot customizable linear genomes displaying arbitrary data
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2025-03-25 |
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bioconductor-chipexoqual
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public |
ChIPexoQual
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2025-03-25 |
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bioconductor-cosmic.67
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public |
COSMIC.67
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2025-03-25 |
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bioconductor-cgdv17
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public |
Complete Genomics Diversity Panel, chr17 on 46 individuals
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2025-03-25 |
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bioconductor-u133x3pprobe
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public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was U133\_X3P\_probe\_tab.
|
2025-03-25 |
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bioconductor-u133x3pcdf
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public |
A package containing an environment representing the U133_X3P.cdf file.
|
2025-03-25 |
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bioconductor-u133x3p.db
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public |
Affymetrix Human X3P Array annotation data (chip u133x3p) assembled using data from public repositories
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2025-03-25 |
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bioconductor-u133aaofav2cdf
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public |
A package containing an environment representing the U133AAofAv2.CDF file.
|
2025-03-25 |
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bioconductor-tximeta
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public |
Transcript Quantification Import with Automatic Metadata
|
2025-03-25 |
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bioconductor-txdb.sscrofa.ucsc.susscr3.refgene
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public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-txdb.sscrofa.ucsc.susscr11.refgene
|
public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-rattus.norvegicus
|
public |
Contains the Rattus.norvegicus object to access data from several related annotation packages.
|
2025-03-25 |
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bioconductor-txdb.rnorvegicus.biomart.igis
|
public |
Exposes an annotation databases generated from BioMart by exposing these as TxDb objects
|
2025-03-25 |
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bioconductor-txdb.ptroglodytes.ucsc.pantro5.refgene
|
public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-txdb.ptroglodytes.ucsc.pantro4.refgene
|
public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-mus.musculus
|
public |
Contains the Mus.musculus object to access data from several related annotation packages.
|
2025-03-25 |
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bioconductor-txdb.mmulatta.ucsc.rhemac8.refgene
|
public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-svm2crm
|
public |
Detection of cis-regulatory elements using svm implemented in LiblineaR.
|
2025-03-25 |
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bioconductor-txdb.mmulatta.ucsc.rhemac3.refgene
|
public |
Annotation package for TxDb object(s)
|
2025-03-25 |
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bioconductor-strandcheckr
|
public |
Calculate strandness information of a bam file
|
2025-03-25 |
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bioconductor-tfea.chip
|
public |
Analyze Transcription Factor Enrichment
|
2025-03-25 |
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bioconductor-cellity
|
public |
Quality Control for Single-Cell RNA-seq Data
|
2025-03-25 |
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bioconductor-tenxplore
|
public |
ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics
|
2025-03-25 |
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bioconductor-bionetstat
|
public |
Biological Network Analysis
|
2025-03-25 |
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bioconductor-chipenrich
|
public |
Gene Set Enrichment For ChIP-seq Peak Data
|
2025-03-25 |
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bioconductor-rmmquant
|
public |
RNA-Seq multi-mapping Reads Quantification Tool
|
2025-03-25 |
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bioconductor-nugomm1a520177.db
|
public |
Affymetrix nugomm1a520177 annotation data (chip nugomm1a520177) assembled using data from public repositories
|
2025-03-25 |
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bioconductor-mwgcod.db
|
public |
Codelink Mouse Whole Genome Bioarray (~36 000 mouse gene targets) annotation data (chip mwgcod) assembled using data from public repositories
|
2025-03-25 |
|
bioconductor-mu22v3.db
|
public |
FHCRC Genomics Shared Resource Mu22v3 Annotation Data (Mu22v3) assembled using data from public repositories
|
2025-03-25 |
|
bioconductor-mu19ksubc.db
|
public |
Affymetrix Affymetrix Mu19KsubC Array annotation data (chip mu19ksubc)
|
2025-03-25 |
|
bioconductor-mirsponge
|
public |
The name of the miRsponge package has been changed into "miRspongeR". Future updates will be seen in the miRspongeR package (http://bioconductor.org/packages/miRspongeR/). This package provides several functions to study miRNA sponge (also called ceRNA or miRNA decoy), including popular methods for identifying miRNA sponge interactions, and the integrative method to integrate miRNA sponge interactions from different methods, as well as the functions to validate miRNA sponge interactions, and infer miRNA sponge modules, conduct enrichment analysis of modules, and conduct survival analysis of modules.
|
2025-03-25 |
|
bioconductor-mu19ksubb.db
|
public |
Affymetrix Affymetrix Mu19KsubB Array annotation data (chip mu19ksubb)
|
2025-03-25 |
|
bioconductor-mu19ksuba.db
|
public |
Affymetrix Affymetrix Mu19KsubA Array annotation data (chip mu19ksuba)
|
2025-03-25 |
|
bioconductor-mu15v1.db
|
public |
FHCRC Genomics Shared Resource Mu15v1 Annotation Data (Mu15v1) assembled using data from public repositories
|
2025-03-25 |
|
bioconductor-mu11ksubb.db
|
public |
Affymetrix Affymetrix Mu11KsubB Array annotation data (chip mu11ksubb)
|
2025-03-25 |
|
bioconductor-mu11ksuba.db
|
public |
Affymetrix Affymetrix Mu11KsubA Array annotation data (chip mu11ksuba)
|
2025-03-25 |
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bioconductor-mta10transcriptcluster.db
|
public |
Affymetrix mta10 annotation data (chip mta10transcriptcluster)
|
2025-03-25 |
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bioconductor-mta10probeset.db
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public |
Affymetrix mta10 annotation data (chip mta10probeset)
|
2025-03-25 |
