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bioconductor-ctc
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public |
Cluster and Tree Conversion.
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2024-12-14 |
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bioconductor-isolde
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public |
Integrative Statistics of alleLe Dependent Expression
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2024-12-14 |
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bioconductor-rcaspar
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public |
A package for survival time prediction based on a piecewise baseline hazard Cox regression model.
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2024-12-14 |
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bioconductor-cqn
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public |
Conditional quantile normalization
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2024-12-14 |
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bioconductor-epivizrserver
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public |
WebSocket server infrastructure for epivizr apps and packages
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2024-12-14 |
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ucsc-pslsomerecords
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public |
Extract multiple psl records
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2024-12-14 |
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bioconductor-antiprofiles
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public |
Implementation of gene expression anti-profiles
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2024-12-14 |
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bioconductor-swathxtend
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public |
SWATH extended library generation and statistical data analysis
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2024-12-14 |
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bioconductor-metacca
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public |
Summary Statistics-Based Multivariate Meta-Analysis of Genome-Wide Association Studies Using Canonical Correlation Analysis
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2024-12-14 |
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bioconductor-rnaseqcomp
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public |
Benchmarks for RNA-seq Quantification Pipelines
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2024-12-14 |
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bioconductor-iaseq
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public |
iASeq: integrating multiple sequencing datasets for detecting allele-specific events
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2024-12-14 |
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bioconductor-pepxmltab
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public |
Parsing pepXML files and filter based on peptide FDR.
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2024-12-14 |
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bioconductor-rlmm
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public |
A Genotype Calling Algorithm for Affymetrix SNP Arrays
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2024-12-14 |
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bioconductor-mergeomics
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public |
Integrative network analysis of omics data
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2024-12-14 |
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bioconductor-dyndoc
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public |
Dynamic document tools
|
2024-12-14 |
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ucsc-axtsort
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public |
Sort axt files
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2024-12-14 |
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bioconductor-rbiopaxparser
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public |
Parses BioPax files and represents them in R
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2024-12-14 |
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bioconductor-roc
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public |
utilities for ROC, with microarray focus
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2024-12-14 |
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bioconductor-messina
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public |
Single-gene classifiers and outlier-resistant detection of differential expression for two-group and survival problems
|
2024-12-14 |
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bioconductor-lbe
|
public |
Estimation of the false discovery rate
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2024-12-14 |
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bioconductor-snpediar
|
public |
Query data from SNPedia
|
2024-12-14 |
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bioconductor-lpe
|
public |
Methods for analyzing microarray data using Local Pooled Error (LPE) method
|
2024-12-14 |
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fastani
|
public |
FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
|
2024-12-14 |
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bioconductor-zlibbioc
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public |
An R packaged zlib-1.2.5
|
2024-12-14 |
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bioconductor-gewist
|
public |
Gene Environment Wide Interaction Search Threshold
|
2024-12-14 |
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bioconductor-slqpcr
|
public |
Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH
|
2024-12-14 |
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bioconductor-clustersignificance
|
public |
The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data
|
2024-12-14 |
|
bioconductor-rtcga
|
public |
The Cancer Genome Atlas Data Integration
|
2024-12-14 |
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bioconductor-heatplus
|
public |
Heatmaps with row and/or column covariates and colored clusters
|
2024-12-14 |
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bioconductor-xmapbridge
|
public |
Export plotting files to the xmapBridge for visualisation in X:Map
|
2024-12-14 |
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gappa
|
public |
Genesis Applications for Phylogenetic Placement Analysis
|
2024-12-14 |
|
bioconductor-icens
|
public |
NPMLE for Censored and Truncated Data
|
2024-12-14 |
|
bioconductor-sseq
|
public |
Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size
|
2024-12-14 |
|
ucsc-psltobigpsl
|
public |
converts psl to bigPsl input (bed format with extra fields)
|
2024-12-14 |
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bioconductor-iseq
|
public |
Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models
|
2024-12-14 |
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bioconductor-tximport
|
public |
Import and summarize transcript-level estimates for transcript- and gene-level analysis
|
2024-12-14 |
|
bioconductor-les
|
public |
Identifying Differential Effects in Tiling Microarray Data
|
2024-12-14 |
|
bioconductor-seqlogo
|
public |
Sequence logos for DNA sequence alignments
|
2024-12-14 |
|
bioconductor-affxparser
|
public |
Affymetrix File Parsing SDK
|
2024-12-14 |
|
bioconductor-massarray
|
public |
Analytical Tools for MassArray Data
|
2024-12-14 |
|
vt
|
public |
A tool set for short variant discovery in genetic sequence data
|
2024-12-14 |
|
bioconductor-quaternaryprod
|
public |
Computes the Quaternary Dot Product Scoring Statistic for Signed and Unsigned Causal Graphs
|
2024-12-14 |
|
bioconductor-iterativebmasurv
|
public |
The Iterative Bayesian Model Averaging (BMA) Algorithm For Survival Analysis
|
2024-12-14 |
|
bioconductor-path2ppi
|
public |
Prediction of pathway-related protein-protein interaction networks
|
2024-12-14 |
|
bioconductor-simlr
|
public |
Single-cell Interpretation via Multi-kernel LeaRning (SIMLR)
|
2024-12-14 |
|
bioconductor-basespacer
|
public |
R SDK for BaseSpace RESTful API
|
2024-12-14 |
|
bioconductor-spikeli
|
public |
Affymetrix Spike-in Langmuir Isotherm Data Analysis Tool
|
2024-12-14 |
|
bioconductor-impute
|
public |
impute: Imputation for microarray data
|
2024-12-14 |
|
bioconductor-pathnet
|
public |
An R package for pathway analysis using topological information
|
2024-12-14 |
|
bioconductor-sincell
|
public |
R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data
|
2024-12-14 |
