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tower-cli
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public |
The Tower CLI an interface to Nextflow Tower via the CLI
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2025-04-23 |
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autocycler
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public |
A tool for generating consensus long-read assemblies for bacterial genomes.
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2025-04-23 |
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mgnify-pipelines-toolkit
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public |
Collection of scripts and tools for MGnify pipelines.
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2025-04-23 |
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deacon
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public |
Fast alignment-free sequence filter
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2025-04-23 |
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hmftools-orange
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public |
ORANGE summarizes the key outputs from all algorithms in the Hartwig suite.
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2025-04-23 |
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ampliconsuite
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public |
An end-to-end wrapper for focal amplification analysis from whole-genome sequencing using AmpliconArchitect and associated tools.
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2025-04-23 |
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bellavista
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public |
Python package for interactive visualization of imaging-based spatial transcriptomics.
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2025-04-23 |
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graphembed
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public |
Efficient and Robust Graph/Network Embedding via High-Order Proximity Preservation or Recursive Sketching.
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2025-04-23 |
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mimick
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public |
Simulate linked-read data.
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2025-04-23 |
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pggb
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public |
PanGenome Graph Building pipeline renders
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2025-04-23 |
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smoothxg
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public |
Local reconstruction of variation graphs using partial order alignment.
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2025-04-23 |
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lsabgc
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public |
lsaBGC-Pan - refined workflow for pan-BGC-omic evolutionary investigations.
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2025-04-23 |
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odgi
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public |
An optimized dynamic genome/graph implementation.
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2025-04-23 |
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predictosaurus
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public |
Predictosaurus is a command-line tool designed for uncertainty-aware haplotype-based genomic variant effect prediction.
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2025-04-23 |
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wakhan
|
public |
A tool to analyze haplotype-specific chromosome-scale somatic copy number aberrations and aneuploidy using long reads
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2025-04-23 |
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r-easypar
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public |
The easypar package makes it easy to implement parallel computations in R. To use this package, you need to have a function that carries out your desired computation. easypar will take care of the burden of turning that function into a runnable parallel piece of code, offering a soilution based on the foreach and doParallel paradigms for parallel computing, or generating array jobs for the popular LSF workload for distributed high performance computing.
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2025-04-23 |
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panman
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public |
PanMAN
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2025-04-23 |
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prooverlap
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public |
Assessing feature proximity/overlap and testing statistical significance from genomic intervals
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2025-04-23 |
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bygul
|
public |
Bygul is an amplicon read simulating tool that can generate different sample read proportions based on user input.
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2025-04-23 |
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cligv
|
public |
command line Interactive Genome Viewer
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2025-04-23 |
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vireosnp
|
public |
vireoSNP - donor deconvolution for multiplexed scRNA-seq data.
|
2025-04-23 |
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conservation
|
public |
Evolutionary Conservation of Amino Acids and Codons
|
2025-04-23 |
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twilight
|
public |
TWILIGHT: A high throughput tool for tall and wide multiple sequence alignment.
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2025-04-23 |
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nbitk
|
public |
nbitk: Naturalis BioInformatics ToolKit
|
2025-04-23 |
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deepdetails
|
public |
Deep-learning-based DEconvolution of Tissue profiles with Accurate Interpretation of Locus-specific Signals (DeepDETAILS)
|
2025-04-23 |
