|
bioconductor-rnaeditr
|
public |
Statistical analysis of RNA editing sites and hyper-editing regions
|
2024-12-31 |
|
bioconductor-minfi
|
public |
Analyze Illumina Infinium DNA methylation arrays
|
2024-12-31 |
|
bioconductor-cogito
|
public |
Compare genomic intervals tool - Automated, complete, reproducible and clear report about genomic and epigenomic data sets
|
2024-12-31 |
|
bioconductor-agimicrorna
|
public |
Processing and Differential Expression Analysis of Agilent microRNA chips
|
2024-12-31 |
|
bioconductor-gnosis
|
public |
Genomics explorer using statistical and survival analysis in R
|
2024-12-31 |
|
bioconductor-affycoretools
|
public |
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
|
2024-12-31 |
|
bioconductor-cancer
|
public |
A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC
|
2024-12-31 |
|
bioconductor-reportingtools
|
public |
Tools for making reports in various formats
|
2024-12-31 |
|
bioconductor-chipseq
|
public |
chipseq: A package for analyzing chipseq data
|
2024-12-30 |
|
bioconductor-cbaf
|
public |
Automated functions for comparing various omic data from cbioportal.org
|
2024-12-30 |
|
bioconductor-girafe
|
public |
Genome Intervals and Read Alignments for Functional Exploration
|
2024-12-30 |
|
bioconductor-scp
|
public |
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
|
2024-12-30 |
|
bioconductor-chipseqr
|
public |
Identifying Protein Binding Sites in High-Throughput Sequencing Data
|
2024-12-30 |
|
t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
|
2024-12-30 |
|
bioconductor-fastqcleaner
|
public |
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
|
2024-12-30 |
|
bioconductor-amplican
|
public |
Automated analysis of CRISPR experiments
|
2024-12-30 |
|
bioconductor-cner
|
public |
CNE Detection and Visualization
|
2024-12-30 |
|
bioconductor-cbioportaldata
|
public |
Exposes and Makes Available Data from the cBioPortal Web Resources
|
2024-12-30 |
|
bioconductor-shortread
|
public |
FASTQ input and manipulation
|
2024-12-30 |
|
bioconductor-rhdf5
|
public |
R Interface to HDF5
|
2024-12-30 |
|
bioconductor-pwalign
|
public |
Perform pairwise sequence alignments
|
2024-12-30 |
|
bioconductor-rhdf5filters
|
public |
HDF5 Compression Filters
|
2024-12-30 |
|
snakemake-storage-plugin-irods
|
public |
A Snakemake plugin for handling input and output on iRODS
|
2024-12-30 |
|
pybiolib
|
public |
BioLib Python Client
|
2024-12-30 |
|
bioconductor-inspect
|
public |
Modeling RNA synthesis, processing and degradation with RNA-seq data
|
2024-12-30 |
|
bioconductor-magpie
|
public |
MeRIP-Seq data Analysis for Genomic Power Investigation and Evaluation
|
2024-12-30 |
|
bioconductor-imas
|
public |
Integrative analysis of Multi-omics data for Alternative Splicing
|
2024-12-30 |
|
bioconductor-glmsparsenet
|
public |
Network Centrality Metrics for Elastic-Net Regularized Models
|
2024-12-30 |
|
bioconductor-rtcgatoolbox
|
public |
A new tool for exporting TCGA Firehose data
|
2024-12-30 |
|
bioconductor-eupathdb
|
public |
Brings together annotation resources from the various EuPathDB databases (PlasmoDB, ToxoDB, TriTrypDB, etc.) and makes them available in R using the AnnotationHub framework.
|
2024-12-30 |
|
bioconductor-ahmassbank
|
public |
MassBank Annotation Resources for AnnotationHub
|
2024-12-30 |
|
bioconductor-experimenthubdata
|
public |
Add resources to ExperimentHub
|
2024-12-30 |
|
bioconductor-rgreat
|
public |
GREAT Analysis - Functional Enrichment on Genomic Regions
|
2024-12-30 |
|
bioconductor-outsplice
|
public |
Comparison of Splicing Events between Tumor and Normal Samples
|
2024-12-30 |
|
bioconductor-nearbynding
|
public |
Discern RNA structure proximal to protein binding
|
2024-12-30 |
|
bioconductor-rcgh
|
public |
Comprehensive Pipeline for Analyzing and Visualizing Array-Based CGH Data
|
2024-12-30 |
|
bioconductor-strandcheckr
|
public |
Calculate strandness information of a bam file
|
2024-12-30 |
|
bioconductor-fdb.infiniummethylation.hg19
|
public |
Compiled HumanMethylation27 and HumanMethylation450 annotations
|
2024-12-30 |
|
bioconductor-fdb.infiniummethylation.hg18
|
public |
Compiled HumanMethylation27 and HumanMethylation450 annotations
|
2024-12-30 |
|
bioconductor-proloc
|
public |
A unifying bioinformatics framework for spatial proteomics
|
2024-12-30 |
|
bioconductor-rcistarget
|
public |
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions
|
2024-12-30 |
|
bioconductor-meshr
|
public |
Tools for conducting enrichment analysis of MeSH
|
2024-12-30 |
|
bioconductor-gostats
|
public |
Tools for manipulating GO and microarrays
|
2024-12-30 |
|
bioconductor-ccpromise
|
public |
PROMISE analysis with Canonical Correlation for Two Forms of High Dimensional Genetic Data
|
2024-12-30 |
|
bioconductor-scclassify
|
public |
scClassify: single-cell Hierarchical Classification
|
2024-12-30 |
|
bioconductor-sigcheck
|
public |
Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata
|
2024-12-30 |
|
bioconductor-doppelgangr
|
public |
Identify likely duplicate samples from genomic or meta-data
|
2024-12-30 |
|
bioconductor-edge
|
public |
Extraction of Differential Gene Expression
|
2024-12-30 |
|
bioconductor-dexma
|
public |
Differential Expression Meta-Analysis
|
2024-12-30 |
|
bioconductor-qsmooth
|
public |
Smooth quantile normalization
|
2024-12-30 |
