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bioconductor-diggit
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public |
Inference of Genetic Variants Driving Cellular Phenotypes
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2024-12-18 |
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bioconductor-gaga
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public |
GaGa hierarchical model for high-throughput data analysis
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2024-12-18 |
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umis
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public |
Tools for processing UMI RNA-tag data
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2024-12-18 |
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bioconductor-bronchialil13
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public |
time course experiment involving il13
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2024-12-18 |
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bioconductor-affyrnadegradation
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public |
Analyze and correct probe positional bias in microarray data due to RNA degradation
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2024-12-18 |
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bioconductor-ocplus
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public |
Operating characteristics plus sample size and local fdr for microarray experiments
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2024-12-18 |
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bioconductor-densvis
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public |
Density-Preserving Data Visualization via Non-Linear Dimensionality Reduction
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2024-12-18 |
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epic2
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public |
Ultraperformant Chip-Seq broad domain finder based on SICER.
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2024-12-18 |
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bioconductor-sconify
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public |
A toolkit for performing KNN-based statistics for flow and mass cytometry data
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2024-12-18 |
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bioconductor-biomvcclass
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public |
Model-View-Controller (MVC) Classes That Use Biobase
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2024-12-18 |
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r-structssi
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public |
Performs multiple testing corrections that take specific structure of hypotheses into account.
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2024-12-18 |
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perl-list-moreutils-xs
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public |
Provide the stuff missing in List::Util in XS
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2024-12-18 |
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bioconductor-flowai
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public |
Automatic and interactive quality control for flow cytometry data
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2024-12-18 |
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bioconductor-targetdecoy
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public |
Diagnostic Plots to Evaluate the Target Decoy Approach
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2024-12-18 |
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bioconductor-deconrnaseq
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public |
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data
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2024-12-18 |
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bioconductor-affycompdata
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public |
affycomp data
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2024-12-18 |
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bioconductor-cardinalio
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public |
Read and write mass spectrometry imaging files
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2024-12-18 |
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deltapd
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public |
DeltaPD is a tool used to determine outliers in a gene tree when compared against a reference tree.
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2024-12-18 |
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r-genomictools.filehandler
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public |
A collection of I/O tools for handling the most commonly used genomic datafiles, like fasta/-q, bed, gff, gtf, ped/map and vcf.
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2024-12-18 |
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mutyper
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public |
A Python package and command line utility for annotating the local ancestral sequence context of biallelic SNPs.
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2024-12-18 |
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bioconductor-matter
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public |
Out-of-core statistical computing and signal processing
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2024-12-18 |
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bioconductor-mzid
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public |
An mzIdentML parser for R
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2024-12-18 |
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centrosome
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public |
An open source image processing library. Dependency for CellProfiler
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2024-12-18 |
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samsum
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public |
A light-weight python package for summarizing sequence coverage from SAM and BAM files
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2024-12-18 |
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bioconductor-protgenerics
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public |
Generic infrastructure for Bioconductor mass spectrometry packages
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2024-12-18 |
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rnashapes
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public |
RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.
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2024-12-18 |
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acms
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public |
Ambivalent Covariance Models (aCMs) are our prototypic suggestion to extend CMs with more than one consensus structure.
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2024-12-18 |
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pkiss
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public |
RNA secondary structure prediction including K-type and kissing hairpin- pseudoknots.
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2024-12-18 |
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knotinframe
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public |
Predicts -1 frameshift sites with simple pseudoknots
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2024-12-18 |
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bioconductor-seqtools
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public |
Analysis of nucleotide, sequence and quality content on fastq files
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2024-12-18 |
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minimap2
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public |
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
|
2024-12-18 |
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bioconductor-snpstats
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public |
SnpMatrix and XSnpMatrix classes and methods
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2024-12-18 |
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opticlust
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public |
Single cell clustering and recommendations at a glance.
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2024-12-18 |
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lexicmap
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public |
efficient sequence alignment against millions of prokaryotic genomes
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2024-12-18 |
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svseq2
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public |
An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data
|
2024-12-18 |
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melon
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public |
Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes
|
2024-12-18 |
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seqsizzle
|
public |
A pager for viewing FASTQ files with fuzzy adaptor matching and coloring.
|
2024-12-18 |
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cortexpy
|
public |
A Python API for manipulating (Mc)Cortex de novo assembly graph and link data
|
2024-12-18 |
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bioconductor-fmcsr
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public |
Mismatch Tolerant Maximum Common Substructure Searching
|
2024-12-18 |
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r-restfulr
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public |
Models a RESTful service as if it were a nested R list.
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2024-12-18 |
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necat
|
public |
Nanopore data assembler
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2024-12-18 |
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medicc2
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public |
Whole-genome doubling-aware copy number phylogenies for cancer evolution
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2024-12-18 |
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bioconductor-hem
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public |
Heterogeneous error model for identification of differentially expressed genes under multiple conditions
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2024-12-18 |
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bioconductor-mulcom
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public |
Calculates Mulcom test
|
2024-12-18 |
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bioconductor-eir
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public |
Accelerated similarity searching of small molecules
|
2024-12-18 |
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bioconductor-cancerclass
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public |
Development and validation of diagnostic tests from high-dimensional molecular data
|
2024-12-18 |
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bioconductor-discordant
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public |
The Discordant Method: A Novel Approach for Differential Correlation
|
2024-12-18 |
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bioconductor-nanostringdiff
|
public |
Differential Expression Analysis of NanoString nCounter Data
|
2024-12-18 |
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bioconductor-flowcatchr
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public |
Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells
|
2024-12-18 |
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bioconductor-yeastexpdata
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public |
Yeast Experimental Data
|
2024-12-18 |
