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bioconductor-beachmat.hdf5
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public |
beachmat bindings for HDF5-backed matrices
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2025-01-03 |
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bioconductor-degnorm
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public |
DegNorm: degradation normalization for RNA-seq data
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2025-01-03 |
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bioconductor-arrayqualitymetrics
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public |
Quality metrics report for microarray data sets
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2025-01-03 |
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bioconductor-cellbench
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public |
Construct Benchmarks for Single Cell Analysis Methods
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2025-01-03 |
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bioconductor-descan2
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public |
Differential Enrichment Scan 2
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2025-01-03 |
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bioconductor-fourdndata
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public |
4DN data package
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2025-01-03 |
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bioconductor-daglogo
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public |
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory
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2025-01-03 |
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bioconductor-enhancerhomologsearch
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public |
Identification of putative mammalian orthologs to given enhancer
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2025-01-03 |
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bioconductor-drugtargetinteractions
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public |
Drug-Target Interactions
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2025-01-03 |
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bioconductor-findit2
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public |
find influential TF and Target based on multi-omics data
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2025-01-03 |
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bioconductor-biocpkgtools
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public |
Collection of simple tools for learning about Bioconductor Packages
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2025-01-03 |
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bioconductor-genegeneinter
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public |
Tools for Testing Gene-Gene Interaction at the Gene Level
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2025-01-03 |
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bioconductor-flowsom
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public |
Using self-organizing maps for visualization and interpretation of cytometry data
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2025-01-03 |
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bioconductor-atsnp
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public |
Affinity test for identifying regulatory SNPs
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2025-01-03 |
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bioconductor-desousa2013
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public |
Poor prognosis colon cancer is defined by a molecularly distinct subtype and precursor lesion
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2025-01-03 |
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bioconductor-curatedtbdata
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public |
Curation of existing tuberculosis transcriptomic studies
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2025-01-03 |
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bioconductor-easylift
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public |
An R package to perform genomic liftover
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2025-01-03 |
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bioconductor-cnvpanelizer
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public |
Reliable CNV detection in targeted sequencing applications
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2025-01-03 |
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bioconductor-genenetworkbuilder
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public |
GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data
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2025-01-03 |
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bioconductor-bnbc
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public |
Bandwise normalization and batch correction of Hi-C data
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2025-01-03 |
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bioconductor-fgga
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public |
Hierarchical ensemble method based on factor graph
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2025-01-03 |
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bioconductor-drugvsdisease
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public |
Comparison of disease and drug profiles using Gene set Enrichment Analysis
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2025-01-03 |
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bioconductor-corral
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public |
Correspondence Analysis for Single Cell Data
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2025-01-03 |
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bioconductor-filterffpe
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public |
FFPE Artificial Chimeric Read Filter for NGS data
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2025-01-03 |
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bioconductor-eventpointer
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public |
An effective identification of alternative splicing events using junction arrays and RNA-Seq data
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2025-01-03 |
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bioconductor-dnazoodata
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public |
DNA Zoo data package
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2025-01-03 |
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bioconductor-eudysbiome
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public |
Cartesian plot and contingency test on 16S Microbial data
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2025-01-03 |
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bioconductor-bioplex
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public |
R-side access to BioPlex protein-protein interaction data
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2025-01-03 |
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bioconductor-generegionscan
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public |
GeneRegionScan
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2025-01-03 |
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bioconductor-cellbaser
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public |
Querying annotation data from the high performance Cellbase web
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2025-01-03 |
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bioconductor-cimice
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public |
CIMICE-R: (Markov) Chain Method to Inferr Cancer Evolution
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2025-01-03 |
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bioconductor-flowfp
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public |
Fingerprinting for Flow Cytometry
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2025-01-03 |
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bioconductor-dnafusion
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public |
Identification of gene fusions using paired-end sequencing
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2025-01-03 |
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bioconductor-bags
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public |
A Bayesian Approach for Geneset Selection
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2025-01-03 |
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bioconductor-immunoclust
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public |
immunoClust - Automated Pipeline for Population Detection in Flow Cytometry
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2025-01-03 |
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bioconductor-flowmatch
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public |
Matching and meta-clustering in flow cytometry
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2025-01-03 |
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bioconductor-tidytof
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public |
Analyze High-dimensional Cytometry Data Using Tidy Data Principles
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2025-01-03 |
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bioconductor-alabaster.files
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public |
Wrappers to Save Common File Formats
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2025-01-03 |
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fusion-report
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public |
Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline
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2025-01-03 |
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bioconductor-atena
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public |
Analysis of Transposable Elements
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2025-01-03 |
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bioconductor-animalcules
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public |
Interactive microbiome analysis toolkit
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2025-01-03 |
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bioconductor-adapt
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public |
Analysis of Microbiome Differential Abundance by Pooling Tobit Models
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2025-01-03 |
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bioconductor-alabaster.bumpy
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public |
Save and Load BumpyMatrices to/from file
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2025-01-03 |
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bioconductor-a4
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public |
Automated Affymetrix Array Analysis Umbrella Package
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2025-01-03 |
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bioconductor-biocfhir
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public |
Illustration of FHIR ingestion and transformation using R
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2025-01-03 |
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bioconductor-affyilm
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public |
Linear Model of background subtraction and the Langmuir isotherm
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2025-01-03 |
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gencove
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public |
Gencove is a high-throughput, cost-effective platform for genome sequencing and analysis. This command-line interface can be used to easily access the Gencove API.
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2025-01-03 |
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scarap
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public |
A toolkit for prokaryotic comparative genomics
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2025-01-03 |
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biox
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public |
Biological Sequence Compression Tool
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2025-01-03 |
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r-liger
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public |
Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. See Welch J, Kozareva V, et al (2019) <doi:10.1016/j.cell.2019.05.006>, and Liu J, Gao C, Sodicoff J, et al (2020) <doi:10.1038/s41596-020-0391-8> for more details.
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2025-01-03 |
