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r-circrnafull
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public |
An R package for reconstruction of full length circRNA sequence using chimeric alignment information
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2025-07-31 |
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muscle
|
public |
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences
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2025-07-31 |
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bx-python
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public |
Tools for manipulating biological data, particularly multiple sequence alignments.
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2025-07-31 |
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kmer-db
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public |
Kmer-db is a fast and memory-efficient tool for estimating evolutionary distances.
|
2025-07-30 |
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agc
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public |
Assembled Genomes Compressor (AGC) is a tool designed to compress collections of de-novo assembled genomes. It can be used for various types of datasets: short genomes (viruses) as well as long (humans).
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2025-07-30 |
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reseek
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public |
Protein structure alignment and search algorithm.
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2025-07-30 |
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racon
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public |
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads.
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2025-07-30 |
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khipu-metabolomics
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public |
Python library for generalized, low-level annotation of MS metabolomics.
|
2025-07-30 |
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rust-gtars
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public |
Performance-critical tools to manipulate, analyze, and process genomic interval data.
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2025-07-30 |
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fishplotpy
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public |
A Python implementation for visualizing clonal evolution dynamics using fish plots
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2025-07-30 |
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tmb
|
public |
This tool was designed to calculate a Tumor Mutational Burden (TMB) score from a VCF file.
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2025-07-30 |
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delly
|
public |
Structural variant discovery by integrated paired-end and split-read analysis.
|
2025-07-30 |
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influx-si-data-manager
|
public |
Data manager for handling influx_si inputs on Workflow4Metabolomics (usegalaxy.org)
|
2025-07-30 |
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eukrep
|
public |
Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets
|
2025-07-30 |
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snakemake-executor-plugin-cluster-sync
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public |
A Snakemake executor plugin for cluster jobs that are executed synchronously.
|
2025-07-30 |
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epicore
|
public |
Compute core epitopes from multiple overlapping peptides.
|
2025-07-30 |
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svpg
|
public |
Pangenome-based structural variation caller
|
2025-07-30 |
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foldcomp
|
public |
Foldcomp: a library and format for compressing and indexing large protein structure sets
|
2025-07-30 |
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smakcr
|
public |
Count short k-mers fast
|
2025-07-30 |
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phyling
|
public |
A phylogenetic inference tool based on protein-coding genomic sequences
|
2025-07-30 |
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ska
|
public |
SKA (Split Kmer Analysis)
|
2025-07-30 |
|
nohuman
|
public |
Remove human reads from a sequencing run.
|
2025-07-30 |
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aliceasm
|
public |
Efficient HiFi genome assembler producing haplotype-separated assemblies.
|
2025-07-30 |
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ampliconsplitter
|
public |
Split highly similar collapsed amplicons to obtain all amplicons from a sample.
|
2025-07-30 |
|
libcifpp
|
public |
Library containing code to manipulate mmCIF and PDB files.
|
2025-07-30 |
