| Package Name | Access | Summary | Updated |
|---|---|---|---|
| perl-file-copy-recursive-reduced | public | Recursive copying of files and directories within Perl 5 toolchain. | 2025-08-28 |
| perl-getopt-long-descriptive | public | Getopt::Long, but simpler and more powerful. | 2025-08-28 |
| perl-moosex-getopt | public | A Moose role for processing command line options. | 2025-08-28 |
| perl-bignum | public | Transparent BigNumber support for Perl. | 2025-08-28 |
| perl-pdf-table | public | A utility class for building table layouts in a PDF::API2 object. | 2025-08-28 |
| solvebio | public | The SolveBio Python client. | 2025-08-28 |
| presto | public | A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data. | 2025-08-28 |
| perl-digest-hmac | public | Keyed-Hashing for Message Authentication. | 2025-08-28 |
| trust4 | public | TCR and BCR assembly from bulk or single-cell RNA-seq data. | 2025-08-28 |
| perl-test-class-moose | public | Serious testing for serious Perl. | 2025-08-28 |
| perl-moosex-nonmoose | public | MooseX::NonMoose - easy subclassing of non-Moose classes. | 2025-08-28 |
| align_trim | public | ARTIC align_trim: A tool for trimming amplicon sequencing primers from aligned reads. | 2025-08-28 |
| perl-io-compress | public | IO Interface to compressed data files/buffers. | 2025-08-28 |
| pyopenms | public | Python bindings for OpenMS, an open-source software C++ library for LC-MS data management and analyses. | 2025-08-28 |
| trimmomatic | public | A flexible read trimming tool for Illumina NGS data. | 2025-08-28 |
| abawaca | public | No Summary | 2025-08-28 |
| r-histonehmm | public | histoneHMM is a software to analyse ChIP-seq data of histone modifications with broad genomic footprints like H3K27me3. It allows for calling modified regions in single samples as well as for calling differentially modified regions in a comparison of two samples | 2025-08-28 |
| abundancebin | public | No Summary | 2025-08-28 |
| perl-string-approx | public | No Summary | 2025-08-28 |
| r-liger | public | Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. | 2025-08-28 |
| qglmm | public | Fast Generalized Linear Mixed Models in Python | 2025-08-28 |
| unitig-counter | public | Uses a compressed de Bruijn graph (implemented in GATB) to count unitigs in bacterial populations. | 2025-08-28 |
| oakvar | public | OakVar - Genomic Variant Analysis Platform | 2025-08-28 |
| transrate-tools | public | Command-line tools used by transrate for processing bam files. | 2025-08-28 |
| fastmd5 | public | Fast command-line tool to compute and verify MD5 checksums | 2025-08-28 |
