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bioconductor-pgsea
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public |
Parametric Gene Set Enrichment Analysis
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2025-04-22 |
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bioconductor-plethy
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public |
R framework for exploration and analysis of respirometry data
|
2025-04-22 |
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bioconductor-ping
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public |
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data
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2025-04-22 |
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bioconductor-qualifier
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public |
Quality Control of Gated Flow Cytometry Experiments
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2025-04-22 |
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bioconductor-refnet
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public |
A queryable collection of molecular interactions, from many sources
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2025-04-22 |
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bioconductor-soggi
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public |
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals
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2025-04-22 |
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bioconductor-treeio
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public |
Base Classes and Functions for Phylogenetic Tree Input and Output
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2025-04-22 |
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bioconductor-compepitools
|
public |
Tools for computational epigenomics
|
2025-04-22 |
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cyvcf
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public |
A cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files
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2025-04-22 |
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bioconductor-jaspar2016
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public |
Data package for JASPAR 2016
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2025-04-22 |
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funcannot
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public |
Annotates cDNA, protein, mutation type, and other funcational changes to variants in a VCF file with pre-existing gene annotations (see:genepender).
|
2025-04-22 |
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bioconductor-mspurity
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public |
Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
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2025-04-22 |
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cgview
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public |
CGView is a Java package for generating high quality, zoomable maps of circular genomes.
Its primary purpose is to serve as a component of sequence annotation pipelines, as a
means of generating visual output suitable for the web.
|
2025-04-22 |
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genepender
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public |
Annotates overlapping BED-defined regions to variants in a VCF file. Used primarily for providing a gene/exon context to variants (see:bedtarget).
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2025-04-22 |
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coprarna
|
public |
Target prediction for prokaryotic trans-acting small RNAs
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2025-04-22 |
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r-mqtl
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public |
mQTL provides a complete QTL analysis pipeline for metabolomic data. Distinctive features include normalisation using PQN approach, peak alignment using RSPA approach, dimensionality reduction using SRV approach and finally QTL mapping using R/qtl package.
|
2025-04-22 |
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bioconductor-delayedarray
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public |
A unified framework for working transparently with on-disk and in-memory array-like datasets
|
2025-04-22 |
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misopy
|
public |
Mixture of Isoforms model (MISO) for isoform quantitation using RNA-Seq
|
2025-04-22 |
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meneco
|
public |
Metabolic Network Completion. Compute minimal completions to your draft network with reactions from a repair network.
|
2025-04-22 |
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edd
|
public |
Enriched domain detector for ChIP-seq data
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2025-04-22 |
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r-qtl
|
public |
Analysis of experimental crosses to identify genes (called quantitative trait loci, QTLs) contributing to variation in quantitative traits.
|
2025-04-22 |
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bioconductor-msnbase
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public |
Base Functions and Classes for Mass Spectrometry and Proteomics
|
2025-04-22 |
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moff
|
public |
moFF is an OS independent tool designed to extract apex MS1 intensity using a set of identified MS2 peptides.
|
2025-04-22 |
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pypiper
|
public |
Pypiper is a lightweight python toolkit that helps you write slick pipelines in python.
|
2025-04-22 |
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bioconductor-matter
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public |
Out-of-core statistical computing and signal processing
|
2025-04-22 |
