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bioconda / packages

Package Name Access Summary Updated
bioconductor-ebimage public Image processing and analysis toolbox for R 2024-12-17
bioconductor-fis public Human Functional Interactions (FIs) for splineTimeR package 2024-12-17
bioconductor-bufferedmatrixmethods public Microarray Data related methods that utlize BufferedMatrix objects 2024-12-17
staramr public Scan genome contigs against the ResFinder and PointFinder databases 2024-12-17
sniffles public Sniffles is a structural variation caller using third generation sequencing (PacBio or Oxford Nanopore). 2024-12-17
bioconductor-bader public Bayesian Analysis of Differential Expression in RNA Sequencing Data 2024-12-17
bioconductor-aseb public Predict Acetylated Lysine Sites 2024-12-17
bioconductor-hibag public HLA Genotype Imputation with Attribute Bagging 2024-12-17
bioconductor-chopsticks public The 'snp.matrix' and 'X.snp.matrix' Classes 2024-12-17
bioconductor-dnabarcodes public A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments 2024-12-16
bioconductor-bufferedmatrix public A matrix data storage object held in temporary files 2024-12-16
bioconductor-viper public Virtual Inference of Protein-activity by Enriched Regulon analysis 2024-12-16
bioconductor-spem public S-system parameter estimation method 2024-12-16
bioconductor-affycomp public Graphics Toolbox for Assessment of Affymetrix Expression Measures 2024-12-16
bioconductor-cghbase public CGHbase: Base functions and classes for arrayCGH data analysis. 2024-12-16
bioconductor-convert public Convert Microarray Data Objects 2024-12-16
ivar public iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. 2024-12-16
bioconductor-plgem public Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) 2024-12-16
bioconductor-annotationtools public Annotate microarrays and perform cross-species gene expression analyses using flat file databases 2024-12-16
perl-moosex-role-withoverloading public (DEPRECATED) Roles which support overloading 2024-12-16
bioconductor-randpack public Randomization routines for Clinical Trials 2024-12-16
perl-statistics-r public No Summary 2024-12-16
bioconductor-gsealm public Linear Model Toolset for Gene Set Enrichment Analysis 2024-12-16
perl-cgi public A generic file fetching mechanism 2024-12-16
bioconductor-massir public massiR: MicroArray Sample Sex Identifier 2024-12-16
bioconductor-spktools public Methods for Spike-in Arrays 2024-12-16
bioconductor-methped public A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes 2024-12-16
bioconductor-noiseq public Exploratory analysis and differential expression for RNA-seq data 2024-12-16
bioconductor-michip public MiChip Parsing and Summarizing Functions 2024-12-16
bioconductor-masigpro public Significant Gene Expression Profile Differences in Time Course Gene Expression Data 2024-12-16
bioconductor-qusage public qusage: Quantitative Set Analysis for Gene Expression 2024-12-16
bioconductor-acme public Algorithms for Calculating Microarray Enrichment (ACME) 2024-12-16
bioconductor-dyebias public The GASSCO method for correcting for slide-dependent gene-specific dye bias 2024-12-16
sequencetools public Tools for population genetics on sequencing data 2024-12-16
bioconductor-cma public Synthesis of microarray-based classification 2024-12-16
bioconductor-readqpcr public Read qPCR data 2024-12-16
bioconductor-help public Tools for HELP data analysis 2024-12-16
bioconductor-clusterstab public Compute cluster stability scores for microarray data 2024-12-16
perl-sanger-cgp-vcf public a set of common perl utilities for generating consistent Vcf headers 2024-12-16
bioconductor-dfp public Gene Selection 2024-12-16
bioconductor-rtca public Open-source toolkit to analyse data from xCELLigence System (RTCA) 2024-12-16
bioconductor-cogena public co-expressed gene-set enrichment analysis 2024-12-16
bioconductor-ddct public The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR) 2024-12-16
bioconductor-undo public Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions 2024-12-16
perl-inline-c public C Language Support for Inline 2024-12-16
perl-sub-attribute public Reliable subroutine attribute handlers 2024-12-16
bioconductor-piano public Platform for integrative analysis of omics data 2024-12-16
perl-config-autoconf public A module to implement some of AutoConf macros in pure perl. 2024-12-16
bioconductor-timecourse public Statistical Analysis for Developmental Microarray Time Course Data 2024-12-16
methyldackel public A (mostly) universal methylation extractor for BS-seq experiments. Formerly named PileOMeth. 2024-12-16

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