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cogtriangles
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public |
low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches
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2025-06-11 |
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tadlib
|
public |
A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
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2025-06-11 |
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r-htssip
|
public |
Functions for analyzing high throughput sequencing stable isotope probing (HTS-SIP) data. Analyses include high resolution stable isotope probing (HR-SIP), multi-window high resolution stable isotope probing (MW-HR-SIP), and quantitative stable isotope probing (q-SIP).
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2025-06-11 |
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mavenn
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public |
MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect.
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2025-06-11 |
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taxtastic
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public |
Tools for taxonomic naming and annotation
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2025-06-11 |
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heliano
|
public |
HELIANO: A fast and accurate tool for detection of Helitron-like elements
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2025-06-11 |
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genin2
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public |
Genin2 is a lightining-fast bioinformatic tool to predict genotypes for H5 viruses belonging to the European clade 2.3.4.4b.
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2025-06-11 |
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profile_dists
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public |
Profile Dists: Rapid calcualtion of allele profile distances and distance base querying
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2025-06-11 |
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bakrep-cli
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public |
BakRep-CLI: a commandline tool for the batch download of BakRep datasets
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2025-06-11 |
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genomad
|
public |
Identification of mobile genetic elements.
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2025-06-11 |
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ciriquant
|
public |
Circular RNA quantification pipeline.
|
2025-06-10 |
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pgscatalog.match
|
public |
Tools for matching variants in PGS scoring files and target variant information files.
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2025-06-10 |
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pgenlib
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public |
Python wrapper for pgenlib's basic reader and writer.
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2025-06-10 |
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tagger
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public |
tagger allows you to tag a corpus of documents with search terms that you provide. It is often used to find mentions of proteins, species, diseases, tissues, chemicals and drugs, GO terms, and so forth, in articles in the Medline corpus.
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2025-06-10 |
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gfftk
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public |
GFFtk: genome annotation GFF3 tool kit
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2025-06-10 |
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mapsplice
|
public |
MapSplice is a software for mapping RNA-seq data to reference genome for splice junction discovery that depends only on reference genome, and not on any further annotations.
|
2025-06-10 |
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r-cimpl
|
public |
No Summary
|
2025-06-10 |
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mykrobe
|
public |
Antibiotic resistance prediction in minutes
|
2025-06-10 |
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td2
|
public |
TD2: a tool to find protein coding regions in transcripts.
|
2025-06-09 |
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whatshap
|
public |
Phase genomic variants using DNA sequencing reads (haplotype assembly).
|
2025-06-09 |
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pyvcf3
|
public |
A Variant Call Format reader for Python.
|
2025-06-09 |
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r-mspbwt
|
public |
Multi Symbol Positional Burrows Wheeler Transform
|
2025-06-09 |
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beem-bio
|
public |
Conversion of PDBx/mmCIF files to best effort/minimal PDB files.
|
2025-06-09 |
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somaticseq
|
public |
An ensemble approach to accurately detect somatic mutations.
|
2025-06-09 |
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miniprot-boundary-scorer
|
public |
Miniprot boundary scorer parses introns, starts, stops and exons from miniprot's alignment output and scores them.
|
2025-06-08 |
