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ddprimer
|
public |
Pipeline for designing primers optimized for droplet digital PCR
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2025-08-12 |
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ddquint
|
public |
Droplet Digital PCR Multiplex Analysis for chromosomal copy number detection
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2025-08-12 |
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longcalld
|
public |
longcallD: local-haplotagging-based small and structural variant calling
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2025-08-12 |
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fstic
|
public |
High-performance Rust tool for computing multiple genetic distance metrics (FST, GST, Jost’s D, etc.) from VCFs or allele-frequency tables, with parallel processing and advanced filtering.
|
2025-08-12 |
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bioconductor-survcomp
|
public |
Performance Assessment and Comparison for Survival Analysis
|
2025-08-12 |
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stemcnv-check
|
public |
StemCNV-check: CNV Based Quality Control Workflow for Stem Cell SNP Array Data.
|
2025-08-12 |
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pbsim3
|
public |
A simulator for all types of Pacific Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) long reads
|
2025-08-12 |
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riassigner
|
public |
GC-MS retention index calculation
|
2025-08-12 |
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virheat
|
public |
Visualize microbial evolution at the SNP level by creating a heatmap from vcf files.
|
2025-08-12 |
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t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
|
2025-08-12 |
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ligand-validation
|
public |
Extract ligand and binding site information from PDB X-ray validation reports
|
2025-08-12 |
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phylip
|
public |
Package of programs for inferring phylogenies
|
2025-08-12 |
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mycotools
|
public |
Comparative genomics automation and standardization software.
|
2025-08-12 |
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gustaf
|
public |
Gustaf is a tool primarily designed for multi-split mapping of sequencing reads.
|
2025-08-12 |
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methpipe
|
public |
A pipeline for analyzing DNA methylation data from bisulfite sequencing.
|
2025-08-11 |
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kraken-ea
|
public |
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. This is a modified version allowing for splitting of fastq files based on read classifications.
|
2025-08-11 |
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fgpyo
|
public |
Python bioinformatics and genomics library
|
2025-08-11 |
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bigslice
|
public |
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data.
|
2025-08-11 |
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bioconductor-dreamlet
|
public |
Cohort-scale differential expression analysis of single cell data using linear (mixed) models
|
2025-08-11 |
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unifire
|
public |
UniFIRE is the official protein annotator from Uniprot. It runs both UniRule and ARBA to assign protein function.
|
2025-08-11 |
|
perl-test-script
|
public |
Basic cross-platform tests for scripts
|
2025-08-11 |
|
anndata2ri
|
public |
Convert between AnnData and SingleCellExperiment.
|
2025-08-11 |
|
promod3
|
public |
ProMod3 is a tool for protein structure prediction and refinement
|
2025-08-11 |
|
openstructure
|
public |
Open-Source Computational Structural Biology Framework.
|
2025-08-11 |
|
blast
|
public |
BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit.
|
2025-08-11 |
