| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-scarray.sat | public | Large-scale single-cell RNA-seq data analysis using GDS files and Seurat | 2025-04-22 |
| bioconductor-sgcp | public | SGCP: A semi-supervised pipeline for gene clustering using self-training approach in gene co-expression networks | 2025-04-22 |
| bioconductor-scrnaseqapp | public | A single-cell RNAseq Shiny app-package | 2025-04-22 |
| bioconductor-msquality | public | MsQuality - Quality metric calculation from Spectra and MsExperiment objects | 2025-04-22 |
| bioconductor-ahmassbank | public | MassBank Annotation Resources for AnnotationHub | 2025-04-22 |
| bioconductor-spatialomicsoverlay | public | Spatial Overlay for Omic Data from Nanostring GeoMx Data | 2025-04-22 |
| bioconductor-magpie | public | MeRIP-Seq data Analysis for Genomic Power Investigation and Evaluation | 2025-04-22 |
| bioconductor-moleculeexperiment | public | Prioritising a molecule-level storage of Spatial Transcriptomics Data | 2025-04-22 |
| bioconductor-microstasis | public | Microbiota STability ASsessment via Iterative cluStering | 2025-04-22 |
| conipher | public | CONIPHER is an R package for clustering mutation data and reconstruction of tumor phylogenetic trees from DNA sequencing. | 2025-04-22 |
| kmtricks | public | A k-mer matrix framework | 2025-04-22 |
| peekseq | public | De novo protein-coding potential calculator using a k-mer approach | 2025-04-22 |
| est-sfs | public | est-sfs ( Keightley and Jackson, 2018) is a stand-alone implementation of a method to infer the unfolded site frequency spectrum (the uSFS) and ancestral state probabilities by maximum likelihood (ML). | 2025-04-22 |
| liftover | public | A Python package for converting point coordinates between genome assemblies, inspired by pyliftover. | 2025-04-22 |
| bioconductor-scvir | public | experimental inferface from R to scvi-tools | 2025-04-22 |
| bioconductor-mastr | public | Markers Automated Screening Tool in R | 2025-04-22 |
| bioconductor-despace | public | DESpace: a framework to discover spatially variable genes | 2025-04-22 |
| bioconductor-fourdndata | public | 4DN data package | 2025-04-22 |
| perl-perldoc | public | Documentation Framework for Perl | 2025-04-22 |
| bioconductor-cosia | public | An Investigation Across Different Species and Tissues | 2025-04-22 |
| bioconductor-zygositypredictor | public | Package for prediction of zygosity for variants/genes in NGS data | 2025-04-22 |
| bioconductor-bsgenomeforge | public | Forge your own BSgenome data package | 2025-04-22 |
| bioconductor-bsgenome.hsapiens.ucsc.hs1 | public | Full genomic sequences for UCSC genome hs1 (Homo sapiens) | 2025-04-22 |
| bioconductor-ctdata | public | Data companion to CTexploreR | 2025-04-22 |
| bioconductor-msdatahub | public | Mass Spectrometry Data on ExperimentHub | 2025-04-22 |
