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Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017) <doi:10.1093/bioinformatics/btv359>, Stern, Yaari and Vander Heiden, et al (2014) <doi:10.1126/scitranslmed.3008879>.

Type Size Name Uploaded Downloads Labels
conda 1.6 MB | linux-64/r-alakazam-0.2.10-r3.4.1_0.tar.bz2  6 years and 9 months ago 4155 main cf201901
conda 1.6 MB | osx-64/r-alakazam-0.2.8-r3.4.1_0.tar.bz2  7 years and 3 months ago 4255 main cf201901
conda 1.6 MB | linux-64/r-alakazam-0.2.8-r3.4.1_0.tar.bz2  7 years and 3 months ago 894 main cf201901
conda 1.6 MB | osx-64/r-alakazam-0.2.7-0.tar.bz2  7 years and 3 months ago 4264 main cf201901
conda 1.6 MB | linux-64/r-alakazam-0.2.7-0.tar.bz2  7 years and 3 months ago 726 main cf201901

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