pplacer

Community

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Versions

Installation

To install this package, run one of the following:

Conda

$conda install bioconda::pplacer

Try This Package Beta

Choose a pre-made example or create your own:

Usage Tracking

Version

5 / 8 versions selected

Downloads (Last 6 months): 0

About

Summary

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Last Updated

Oct 10, 2026 at 14:36

License

GPL-3.0

Supported Platforms

linux-64

linux-aarch64

macOS-arm64

Unsupported Platforms

macOS-64 Last supported version: 1.1.alpha17

Home

http://matsen.fredhutch.org/pplacer/

GitHub Repository

https://github.com/matsen/pplacer/