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bioconda / packages / nanocount 1.0.0.post6

Transcript abundance estimation from Nanopore *direct-RNA sequencing* datasets

Installers

  • noarch v1.0.0.post6

conda install

To install this package run one of the following:
conda install bioconda::nanocount

Description

NanoCount estimates transcripts abundance from Oxford Nanopore direct-RNA sequencing datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads


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