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comparative-annotation-toolkit

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A straightforward end-to-end pipeline that takes as input a HAL-format multiple whole genome alignment as well as a GFF3 file representing annotations on one high quality assembly in the HAL alignment, and produces a output GFF3 annotation on all target genomes chosen

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::comparative-annotation-toolkit

Usage Tracking

0.1
1 / 8 versions selected
Total downloads: 0

About

Summary

A straightforward end-to-end pipeline that takes as input a HAL-format multiple whole genome alignment as well as a GFF3 file representing annotations on one high quality assembly in the HAL alignment, and produces a output GFF3 annotation on all target genomes chosen

Information Last Updated

Apr 22, 2025 at 15:28

License

Apache 2.0

Total Downloads

6.0K

Platforms

Linux 64 Version: 0.1
macOS 64 Version: 0.1
noarch Version: 0.1