bioconductor-shinydsp
A Shiny App For Visualizing Nanostring GeoMx DSP Data
A Shiny App For Visualizing Nanostring GeoMx DSP Data
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This package is a Shiny app for interactively analyzing and visualizing Nanostring GeoMX Whole Transcriptome Atlas data. Users have the option of exploring a sample data to explore this app's functionality. Regions of interest (ROIs) can be filtered based on any user-provided metadata. Upon taking two or more groups of interest, all pairwise and ANOVA-like testing are automatically performed. Available ouputs include PCA, Volcano plots, tables and heatmaps. Aesthetics of each output are highly customizable.
Summary
A Shiny App For Visualizing Nanostring GeoMx DSP Data
Last Updated
Mar 15, 2026 at 00:44
License
MIT + file LICENSE
Supported Platforms