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bioconda / packages / bioconductor-packfinder 1.14.0

de novo Annotation of Pack-TYPE Transposable Elements

Installers

  • noarch v1.14.0

conda install

To install this package run one of the following:
conda install bioconda::bioconductor-packfinder

Description

Algorithm and tools for in silico pack-TYPE transposon discovery. Filters a given genome for properties unique to DNA transposons and provides tools for the investigation of returned matches. Sequences are input in DNAString format, and ranges are returned as a dataframe (in the format returned by as.dataframe(GRanges)).


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