CMD + K

bioconductor-goatea

Community

Interactive Exploration of GSEA by the GOAT Method

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-goatea

Usage Tracking

1.0.2
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

Geneset Ordinal Association Test Enrichment Analysis (GOATEA) provides a 'Shiny' interface with interactive visualizations and utility functions for performing and exploring automated gene set enrichment analysis using the 'GOAT' package. 'GOATEA' is designed to support large-scale and user-friendly enrichment workflows across multiple gene lists and comparisons, with flexible plotting and output options. Visualizations pre-enrichment include interactive 'Volcano' and 'UpSet' (overlap) plots. Visualizations post-enrichment include interactive geneset dotplot, geneset treeplot, gene-effectsize heatmap, gene-geneset heatmap and 'STRING' database of protein-protein-interactions network graph. 'GOAT' reference: Frank Koopmans (2024) .

About

Summary

Interactive Exploration of GSEA by the GOAT Method

Last Updated

Mar 15, 2026 at 17:28

License

Apache License (>= 2)

Supported Platforms

noarch